Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1475 ATGGAAGATGATGAGACAATATGCAACACAAGGCTAAGTCTAGAACTAGGTACGGGAGGTTATGTAGTGCCATTAAAGAAGAAGCAGAAATCAGAAGAAGCCTTTAGTAATCATCACCAGAGAGAAGAAGAACTGATCAGTTTGAAGATCAGAATCGATGAAGGAAATGCAAAGAGTGACCATAAGAATGGTTGCAGAAAGAAATTGAGGCTCACAAAGGAGCAATCAACCACACTTGAAGATAGCTTTAAGCTTCATACCTCTCTCAACCCAGTCCAGAAACAAGAACTTGCTCAGAAATTGAATTTGAAGCCCAGACAGATCGAAGTTTGGTTCCAAAACAGAAGAGCAAGGAACAAGTTGAAGCAGACGGAGGTGGACTGTGAGTTCCTGAAGAAATGCTGCGAAAACCTAAGGGACGAGAACAGAAGGTTGAAGAAAGAGGTTGAAGAACTACGTGCTCTGAAAGTTGAAGCATCGTCATCGTCATCATCATCATTATGCAATAACATTCAACTCTCTAAAGTGGCCACACTCGCTATATGTTCCTCTTGTGAGAAGCCATTAATCAAAGGCCATTAA 582 0.4124 MEDDETICNTRLSLELGTGGYVVPLKKKQKSEEAFSNHHQREEELISLKIRIDEGNAKSDHKNGCRKKLRLTKEQSTTLEDSFKLHTSLNPVQKQELAQKLNLKPRQIEVWFQNRRARNKLKQTEVDCEFLKKCCENLRDENRRLKKEVEELRALKVEASSSSSSSLCNNIQLSKVATLAICSSCEKPLIKGH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1475 193 CDD homeodomain 66 123 IPR001356 GO:0003677
Dere14g1475 193 Gene3D - 57 127 - -
Dere14g1475 193 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Dere14g1475 193 SMART halz 122 165 IPR003106 GO:0006355|GO:0043565
Dere14g1475 193 Pfam Homeobox associated leucine zipper 122 155 IPR003106 GO:0006355|GO:0043565
Dere14g1475 193 Pfam Homeodomain 66 120 IPR001356 GO:0003677
Dere14g1475 193 Coils Coil 121 162 - -
Dere14g1475 193 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Dere14g1475 193 SUPERFAMILY Homeodomain-like 57 123 IPR009057 -
Dere14g1475 193 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 34 187 - -
Dere14g1475 193 SMART HOX_1 64 126 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1475 Dere-ChrDere14 15726678 15727761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1475 66 187 Homeobox Transcription Factor Family AT4G37790 64.754 1.05e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere14g1475 Homeodomain 2.5e-16 CL0123