Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1453 ATGGAGAACATCGGCGACGAGTACAAGCATTACTGGGAGACCAACATGTTCCTCCAAACAGAAGAGTTCGACAGCTGGGGATTGGACGAGGCCATCTCCGGCTACTACGATTCGAGCTCGCCGGACGGCGCTGCTTCGTCGTCGGCCGCCTCCAAGAACATTGTCTCCGAGCGCAATCGCAGGAAGAAGCTCAACGAAAGGCTTTTCGCACTCAGAGCAGTGGTCCCTAACATCAGCAAGATGGATAAGGCGTCGATAATAAAGGATGCTATAGAGTACATACAACACTTGCATGAGCAAGAGAAGAGCATTGAGGCTGAGATAATGGAGCTTGAATCTGGGAAGAATATGAATGTGATGATGAACAATAATAACATTAATCCAAGCTATGAGTTTGAGCAGGACCTGCCTGTGCTTCTGAGGTCCAAGAAGAAGAAGACAGAGCAGCGGCTTTTTGATTCTGTAGGCTCAAGAAATTCCCCGATTGAAGTTCATGAGCTGAGAGTTACATATATGGGAGATAAGACATTGGTGGTGAGCTTGACATGCAGCAAAAGGACAGACACAATGGTAAAGCTGTGTGAGGTGTTCGAGTCTTTGAAGCTAAAGATCATTACAGCCAACATAACTTGCTTTTCAGGCAGGCTCTTGAAGACCGTCTTCATTGAGGCAGATGAAGAAGAGAAAGATGTAGTACAAATAAAAATCCAAGCAGCCATTGCAGCTCTTAATGATCCTGAAAGCCCAATGAGCATGTGA 759 0.4625 MENIGDEYKHYWETNMFLQTEEFDSWGLDEAISGYYDSSSPDGAASSSAASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQHLHEQEKSIEAEIMELESGKNMNVMMNNNNINPSYEFEQDLPVLLRSKKKKTEQRLFDSVGSRNSPIEVHELRVTYMGDKTLVVSLTCSKRTDTMVKLCEVFESLKLKIITANITCFSGRLLKTVFIEADEEEKDVVQIKIQAAIAALNDPESPMSM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1453 252 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Dere14g1453 252 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 44 115 - -
Dere14g1453 252 Gene3D - 44 114 IPR036638 GO:0046983
Dere14g1453 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Dere14g1453 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 113 IPR036638 GO:0046983
Dere14g1453 252 Coils Coil 94 114 - -
Dere14g1453 252 SMART finulus 54 103 IPR011598 GO:0046983
Dere14g1453 252 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 38 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1453 Dere-ChrDere14 15317221 15322842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1453 1 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.717 3.58e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g1453 HLH 4.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1453 14 15317221 15322842 Dere14g1453 14 15317221 15322842 ECH