Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1450 ATGTCTTCCATCTTAACCGGAGCAGGTGGAAGAACCTACGGGTTCGACTTAGATTTCGTGAAATCTCCATCTCCGTCGATCCGACCTTCTCACACTTCTTCTTCCTCTTCTTCTCCTTCTTCAACAATATCTGAATCGAGCAATTCCCCTTTATCAATCTCAACCCGAAAACCTCGAACCCCTCGAAAGAGACCGAATCAAACCTACAATGAAGCTGCTGCTCTACTTTCCACGGCCTATCCCAATCTCTTCTCCAACAAAAACCTAAAAAAACCAGGCCAATTCACCCGACCAGCCGACACTGCTTTTCTGGACGAATCCGCAGGGGAATTGTTCTTGCCTTTCAGAGTCTTTGACGGTTCTTCCTCCTCTTACCTTCTTCAACAAATTCAGCACAAAGCTAGTTTTCCGATGGAGCCTAAATTGGTGAATCTGCAAGAAAAGGCGTGCCAGAGCCCAGGGGAGATTATCTCGCGAGTGAATTCGCTGGAGCTGGACGATGATTGCAATGAAGATTTCGATGCCGAATCGATTCTCGATGAAGAAATCGACGAGGGAATTGATAGCATCATGGGAAGCAGAGCCGAAGAAGATTTCAACGGAGCTTCTTGTCATAGCGAAGGAGCGAATAATTGGAGTGTGAATTCCTCGGGATTCGGATTTGGTGGAAAGCACGATTTCCGGCTAGGGTTGGTGAGGGCTCTCCGGCGTGTCAACGATGGAAACTGGTGGAATTTCCCGACGGTCGATATAGCGGAAATCTCGCCAAGGATCAACAAGCAAACGACGTCGTCTGCTGCGTTGGCGGATAAGGAGAAGAAGAAGAAAAAGAAGACAACAACGACGACGGCGACCACGAAGAAGGTGGTCGAGAAAGCGAAGGTGGAGTTGCTGAGAGAAGATTCGATTCCGAAATCGAATGCTTCGAAATTGATGTTGAAACTGAACTACGACGACGTTTTGAGTGCTTGGTCAGACCGGGGTTCGCCGTTCGCCGACGGAATTCCGGGATTCGATGCACCAGAAAAAGATGCCAATGCTCGACTAGCACAGATAAATTTGTTCACGGGGAACGAAGGAGTAAGAGAAGCAAGCGTATTGCGCTACAAGGAAAAGCGACAGACGCGACTCATTTCTAAAAGGATTAGATATCAAGTCAGAAAAGCCAACGCCGATCAACGGCCCAGAATGAAGGGGCGATTTGTGAGGAAGGCCAATCCTAGCTCAAGTACTCAAAGGCGATAA 1245 0.4811 MSSILTGAGGRTYGFDLDFVKSPSPSIRPSHTSSSSSSPSSTISESSNSPLSISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFSNKNLKKPGQFTRPADTAFLDESAGELFLPFRVFDGSSSSYLLQQIQHKASFPMEPKLVNLQEKACQSPGEIISRVNSLELDDDCNEDFDAESILDEEIDEGIDSIMGSRAEEDFNGASCHSEGANNWSVNSSGFGFGGKHDFRLGLVRALRRVNDGNWWNFPTVDIAEISPRINKQTTSSAALADKEKKKKKKTTTTTATTKKVVEKAKVELLREDSIPKSNASKLMLKLNYDDVLSAWSDRGSPFADGIPGFDAPEKDANARLAQINLFTGNEGVREASVLRYKEKRQTRLISKRIRYQVRKANADQRPRMKGRFVRKANPSSSTQRR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1450 414 MobiDBLite consensus disorder prediction 25 56 - -
Dere14g1450 414 ProSiteProfiles CCT domain profile. 362 404 IPR010402 GO:0005515
Dere14g1450 414 Pfam CCT motif 362 404 IPR010402 GO:0005515
Dere14g1450 414 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 12 407 - -
Dere14g1450 414 MobiDBLite consensus disorder prediction 261 282 - -
Dere14g1450 414 MobiDBLite consensus disorder prediction 388 414 - -
Dere14g1450 414 MobiDBLite consensus disorder prediction 23 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1450 Dere-ChrDere14 15287230 15292661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1450 299 404 C2C2-CO-like Transcription Factor Family AT1G73870 44.715 3.21e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere14g1450 CCT 3.8e-17 CL0281