Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1449 ATGCAGGGCAGTGAGAAGAATCTAAATAACAGAGGACCTAGAAAATCCTGTCATTCAAAGGCACAAACTGAGTTAAAACCATGCTCATCATTGAGATTTAAAACTAGTAGCCCAAAATCCCAAGAAAAGAAGCTTAAATTGAAATCAAAATCTTATGCACACAAAGTTGGTGCAAATGTATCAGGGAAGACAGTTGCTGATTCATGTAACAAGGACCCAAGCAAGGATTCTTCAAATAAAAAATTGATTATTAGAAAAAAAATGAATAAAACCAACGGAAAATCATCACAGAAGCTCACTTCATCAAAGGTACAAGGTGAAAGTGTTTCTCTTAGTTCTAGGAAGAACGGAGAAGATGTCAATGAGGAGGTTAAAATTCAGAAACTTAAAAGGAGGAGAAAGAAGAAAAGGCAAAGAGATAATGTGGATCCTGATGATGCTTCACGCCTGCAAAGGAGAATAAGGTATCTTTTAATAAAAATGAAGCTAGAGCAGAACCTTATTGATGCATACTCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAAAAACTTAGGCCAGAAAAGGAGTTACTACGAGCTCAGAAGCAGATTTTGCAATGTAAGCTTAGTATTCGTGATGCCATTCGCCAGTTGGATTCTCTTAGTTCAGTGGGTAGCATTGAAGGCTCTGTCATTGCTCCGGATGGATCTGTTTACCATGAACATATATTCTGTGCAAAGTGCAAATTGCGTGAAGCTTTTCCAGATAATGATATTATACTATGTGATGGCACCTGTAATCGTGCTTTTCACCAAAAATGTCTTGATCCTCCTCTGGACACCGAAAATATTCCTCCTGGAGACCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGATATACTGGAAGCAATAAATGCCCATCTTGGGACTCACTTCTCCCTGGACAGTACTTGGCAGGATGTATTCAAGGAAGAAGCTTCTATACCTGATGGTGATACTAGTTTACTGAATCCAGAAGAAGAATGGCCATCAGATGATTCTGATGATGATGATTATAATCCAGAGAGGAGGGAAGATAGCCACAATATCAGCACGGAAGGAATTGACGATAATGCATCTGATGATTTAAGCAGTTCTACCAGTCTATGGACTTCAGATGATGGATGTTCTTTAGGAACAGGAAAGGAAAACATTGACCATGAATTTTTCTCTGTAAATAGCTGCATAGATTCTGATGAATCTGGAGAGATAGCATGTGGCCGGAGGCAGCGAAAAGCAGTTGACTACAAAAAGCTCTATGATGAAATGTTTGGGAAAGATGCACCTACACTTGAACAAGTTAGTGAAGATGAAGACTGGGGTCCAGGCAAAAGAAAACGAAGAGAAAAGGAATCCGATGCTGTTAATACTCTGATGACTCTACATGAAAGTGAGAATAAAAATCCTAATAATGAGCAGAATATGACAAGGGAAGTTTCTTCAGGCATACAAAGTAGAAGGCCTTGTTTCAGGCTTCCACGTGATGCAGTTGAGAAGCTTCGCCAAGCTTTTGCAGAGAACGAACTTCCTTCAAGATCTGTGAAGGAAGATCTTTCAAAAGAGTTGGGACTGGATGCTGATAAGGTAAGCAAATGGTTCAAGAATGCACGTTACTTAGCTCTTAAAACCAGAAAGCAGGCAGAAGGAGCAGAACAGCTTCAAAGCGTTACTTCCAGAACCCCAAATGATTCTAGTCTGCAAAATCTGGAGATAGAGAATATGCCATCAAAGGAAACCTCAAAAGTAACTTTGACTCATCCGCAGAAGAATGTTAAAAATGACAGTCCTAGAAAGCGCTTAAAGTCATCTAGCCGTAATCCTTTGAAGGAAAGGAAACAAGAAATATCTCCACCTCAATCAAAAGATGGCAACAAGGACTTTGTGGAGTTTGCTGATGATGTTAGCTTGAAGAAACTGTTGAAAGCAAAAAGGAAGAGGAAAGTAAGTTACGTGTTTGAAGGAGACTCCCAGGCAGCAGAGTTGGAATTTGAAAGACTTGGCAAACTGAAGATTAGAGTAGACAATATGAAGCAAACATTAGTTAAAATTCAAAATTACAGAGCACAGGATTCCGAAGAACCCCAATACAAAGAACAATCAGTTATATATGTACCCGTAGCTGAGGTAAGAGAAAAAAGTTGA 2166 0.3934 MQGSEKNLNNRGPRKSCHSKAQTELKPCSSLRFKTSSPKSQEKKLKLKSKSYAHKVGANVSGKTVADSCNKDPSKDSSNKKLIIRKKMNKTNGKSSQKLTSSKVQGESVSLSSRKNGEDVNEEVKIQKLKRRRKKKRQRDNVDPDDASRLQRRIRYLLIKMKLEQNLIDAYSGEGWKGQSREKLRPEKELLRAQKQILQCKLSIRDAIRQLDSLSSVGSIEGSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTENIPPGDQGWFCKFCECKMDILEAINAHLGTHFSLDSTWQDVFKEEASIPDGDTSLLNPEEEWPSDDSDDDDYNPERREDSHNISTEGIDDNASDDLSSSTSLWTSDDGCSLGTGKENIDHEFFSVNSCIDSDESGEIACGRRQRKAVDYKKLYDEMFGKDAPTLEQVSEDEDWGPGKRKRREKESDAVNTLMTLHESENKNPNNEQNMTREVSSGIQSRRPCFRLPRDAVEKLRQAFAENELPSRSVKEDLSKELGLDADKVSKWFKNARYLALKTRKQAEGAEQLQSVTSRTPNDSSLQNLEIENMPSKETSKVTLTHPQKNVKNDSPRKRLKSSSRNPLKERKQEISPPQSKDGNKDFVEFADDVSLKKLLKAKRKRKVSYVFEGDSQAAELEFERLGKLKIRVDNMKQTLVKIQNYRAQDSEEPQYKEQSVIYVPVAEVREKS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1449 721 MobiDBLite consensus disorder prediction 553 634 - -
Dere14g1449 721 SUPERFAMILY FYVE/PHD zinc finger 229 294 IPR011011 -
Dere14g1449 721 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 36 720 - -
Dere14g1449 721 MobiDBLite consensus disorder prediction 441 493 - -
Dere14g1449 721 SMART PHD_3 237 290 IPR001965 -
Dere14g1449 721 ProSitePatterns Zinc finger PHD-type signature. 238 289 IPR019786 -
Dere14g1449 721 Pfam PHD-finger 237 292 IPR019787 -
Dere14g1449 721 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 286 IPR013083 -
Dere14g1449 721 ProSiteProfiles 'Homeobox' domain profile. 491 551 IPR001356 GO:0003677
Dere14g1449 721 MobiDBLite consensus disorder prediction 556 598 - -
Dere14g1449 721 CDD homeodomain 494 554 IPR001356 GO:0003677
Dere14g1449 721 MobiDBLite consensus disorder prediction 334 348 - -
Dere14g1449 721 MobiDBLite consensus disorder prediction 1 146 - -
Dere14g1449 721 MobiDBLite consensus disorder prediction 441 464 - -
Dere14g1449 721 Gene3D - 493 560 - -
Dere14g1449 721 Pfam Homeodomain 502 546 IPR001356 GO:0003677
Dere14g1449 721 FunFam pathogenesis-related homeodomain protein-like 229 289 - -
Dere14g1449 721 MobiDBLite consensus disorder prediction 323 374 - -
Dere14g1449 721 CDD PHD_PRHA_like 237 289 IPR045876 -
Dere14g1449 721 MobiDBLite consensus disorder prediction 69 83 - -
Dere14g1449 721 ProSiteProfiles Zinc finger PHD-type profile. 235 292 IPR019787 -
Dere14g1449 721 MobiDBLite consensus disorder prediction 465 491 - -
Dere14g1449 721 FunFam pathogenesis-related homeodomain protein 493 557 - -
Dere14g1449 721 SMART HOX_1 493 555 IPR001356 GO:0003677
Dere14g1449 721 MobiDBLite consensus disorder prediction 1 36 - -
Dere14g1449 721 SUPERFAMILY Homeodomain-like 493 557 IPR009057 -
Dere14g1449 721 MobiDBLite consensus disorder prediction 599 634 - -
Dere14g1449 721 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1449 Dere-ChrDere14 15272427 15278963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1449 137 553 Homeobox Transcription Factor Family AT4G29940 61.124 1.17e-165 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Dere14g1449 Homeodomain 4.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1449 14 15272427 15278963 Dere14g1449 14 15272427 15278963 ECH