Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1414 ATGTTGACGTCTATCTCTTCTTCTTCTTCTCTTGCTGTAACTGCTGGTTCTAATGATCTTTATTCTTTTGAAGGCCGAATCATGCACAAACGTTCTTCAGGTACAAAGCTAGTCTTTTATGACCTGCATGGTGATCCTTTCAAGGTCCAGGTAATGGCTGATGCAAGGAACTCTGACTTGGATGAGGCTGATTTTATCAAATGCCATTCTAATGTGAAGCGTGGTGATATTGTTGGCGTCACTGGGTTTCCAGGGAAAAGTAAGAAGGGAGAGCTTAGTATTTTCTCCAAGACTTGTACAGTGTTGTCTTATTGTCTAGATATGATGCCAAGACAAAAGTCTGCCGCTGCTGCTGATAATGCAAATTTGAAGAGTAACATATGGGTACCAGGAAGTACTAGGAATCCTGAAACGTACGAAACAAGATATCGTTTACTTCATTTGGATTTGATTCTCAATCCAGAGGTTGAAACACCAATGATGAATGTGATTGCTGGGGGAGCAGCTGCCCGGCCATTTGTAACTCATCACAATGAACTTGAGATGAGGTTATACATTAGAATTGCACCAGAACTCTACCTCAAGGAGCTCATTGTTGGCGGGCTGGATTGTGTTTATGAAATTGGAAGACAGTTTAGAAATGAGGGTATAGATTTGATTCACTATCCTGAGTTCACTACTTGCGAGTTCTATATGGCATATAAGGACTATAATGACTTAATGGAGATTACAGAGCAATTGTTGAGTGGAATTGGTAAGGAGTTTACAAATGGAAGCTATAAAATTAAATATCATTCAGAAGGTGTTGATAAGGATCCAATTGAAATCGACTTTACTCCCTCTTTCAGAAGGATTGACATTAGAGAAGAATTAGAGAAGATAGAAGGCCTCACTATTCCCAAGGACTTGTCTAGTGAGGATGCTAATCAATATCTGAAGGACGCATGCTTGAAGTATGACAGTAAATGTTCTCCCCCTGAAACAACAGCTCGACTGTTGGATAAACCTCTTTTGAGGTCCAGGGTATATGATGGTACATTCATCATATTGCAGCTTGTGGGGCACTTCTTGGAACAAAAGTGTGTGAATCCTACATTCATCATAAACCATCCTGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCTAAACCAGGACTGACAGAACGCTTTGAATTTTTTTGCAATGCATATACTGAACTGAATGACCCTGTAGTGCAACATCGGCAATCAGGTGATGATGAAGCAATGGCCTTTGATGAAACGTTTTGTACAGCTCTGGAGTATGGTTTGCCACCAACTGGTGGTTGTGGTATAGGCATAGACAGGCTTACCATGTTGCTGACAGATTCACAGAACATTAAGGTACAGTACGGGTTGAGGTGTGCTAGACCAATGAGATATAGCCATGTGGACATGCCAAAAGTGTAG 1431 0.4095 MLTSISSSSSLAVTAGSNDLYSFEGRIMHKRSSGTKLVFYDLHGDPFKVQVMADARNSDLDEADFIKCHSNVKRGDIVGVTGFPGKSKKGELSIFSKTCTVLSYCLDMMPRQKSAAAADNANLKSNIWVPGSTRNPETYETRYRLLHLDLILNPEVETPMMNVIAGGAAARPFVTHHNELEMRLYIRIAPELYLKELIVGGLDCVYEIGRQFRNEGIDLIHYPEFTTCEFYMAYKDYNDLMEITEQLLSGIGKEFTNGSYKIKYHSEGVDKDPIEIDFTPSFRRIDIREELEKIEGLTIPKDLSSEDANQYLKDACLKYDSKCSPPETTARLLDKPLLRSRVYDGTFIILQLVGHFLEQKCVNPTFIINHPEIMSPLAKWHRSKPGLTERFEFFCNAYTELNDPVVQHRQSGDDEAMAFDETFCTALEYGLPPTGGCGIGIDRLTMLLTDSQNIKVQYGLRCARPMRYSHVDMPKV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1414 476 Pfam tRNA synthetases class II (D, K and N) 155 455 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dere14g1414 476 CDD LysRS_N 21 150 IPR044136 GO:0000166
Dere14g1414 476 SUPERFAMILY Nucleic acid-binding proteins 18 110 IPR012340 -
Dere14g1414 476 FunFam Lysine--tRNA ligase 9 111 - -
Dere14g1414 476 PANTHER LYSYL-TRNA SYNTHETASE 155 455 - -
Dere14g1414 476 CDD LysRS_core 155 455 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Dere14g1414 476 PRINTS Lysyl-tRNA synthetase signature 165 181 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Dere14g1414 476 PRINTS Lysyl-tRNA synthetase signature 363 379 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Dere14g1414 476 PRINTS Lysyl-tRNA synthetase signature 212 229 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Dere14g1414 476 PRINTS Lysyl-tRNA synthetase signature 194 207 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Dere14g1414 476 SUPERFAMILY Class II aaRS and biotin synthetases 139 455 IPR045864 -
Dere14g1414 476 Gene3D Bira Bifunctional Protein; Domain 2 140 459 IPR045864 -
Dere14g1414 476 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 155 465 IPR006195 -
Dere14g1414 476 Gene3D - 6 111 IPR012340 -
Dere14g1414 476 Pfam OB-fold nucleic acid binding domain 21 101 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1414 Dere-ChrDere14 14519415 14525881 Dispersed/Wgd