Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1407 ATGCATTCGCTTTTTGTTGGTTTGGTGTTTGCAAGATTTTTCACTGTCATTATTCCTGTTGTAGCAATAGGTGCCGGGGCGCTATTGAGTGTCGCCATACGATGTGTAAAATATATTAACCAGCTTCCCAAACCTGCTAAAGCAGTTACTGCAGACACACAAAGTGCAGATACACAATTTCTCACACACACCATGGATAAGTTTCTGCATGAAATGGATAGAGAGAAGCCAATCAGGTTCACCTCGCATCACCTAATGATTGCAACTAATAACTACTCCTACAAGCTGGGGTCAGGAGGTTACGGCTCAGTCTATAGAGGGGTTCTTAGTGATGGAACCATTGTAGCTGTGAAGGTTCTAATTGGAAGTTCTACAGACAAGAGAATGGAGGAGCAGTTCATGGCAGAAGTGGGCACAATTGGAAGAGTTCATCATTTCAATCTAGTTCGCCTCCATGGATATTGCATCGAAAGGAATATGAGAGCTCTAGTTTATGAGTATATGGGCAATGGCTCGCTTGACAAATATTTGTTTCATGAAAACAAGACCTTAACATTTGAAAAGCTTCATGAGATTGCACTTGGAACAGCAAGTGGCATTTCATACTTGCATGAAGAGTGCCAACAAAGAATCATCCACTATGACATAAAACCAGAAAACATCCTCTTGGACCATAACTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCCAAGCTTTGTAATAGGGAAAATACTCATATTACCATGACAGGAGGAAAAGGGACCCCTGGTTATGCTGCACCTGAACTCTGGATGCCATTTCCTATAACTCACAAATGTGATGTTTACAGCTTTGGAATGTTGTTATTTGAAATCATAGGCAAAAGAAGGAACCTTGATGTTAAACTTACAGAGAGCCAAGAGTGGTTTCCTAGGTGGGTTTGGATAAAATTTGATAGCGGAGAACTAACAGAGTTGACAAGAGAATATGGGATAGGGGAGAAAGATAAACAAATAGCTGAAAGAATGGTTAGGACAGCTCTATGGTGTGTTCAATATAGGCCTGAATCTAGACCTTTAATGAGTGTTGTGGTAAAAATGTTGGAGGGTTCCGTGGAAATCCCAGAACCTTTGAACCCTTTTCAATACATGATGGATGGAGGTTTCCTTCCTCATCTAAGCCAAGCAACACCGAGCGATACCAGTTTTGGTTCCAGCTCTACTCAGACTGTATCTGGATCTAATATTGTTCGTGCTACTCCTATCATGAGTAAGTATGAGATTGAAATAACCTCTTGCCAGGATTAA 1287 0.4087 MHSLFVGLVFARFFTVIIPVVAIGAGALLSVAIRCVKYINQLPKPAKAVTADTQSADTQFLTHTMDKFLHEMDREKPIRFTSHHLMIATNNYSYKLGSGGYGSVYRGVLSDGTIVAVKVLIGSSTDKRMEEQFMAEVGTIGRVHHFNLVRLHGYCIERNMRALVYEYMGNGSLDKYLFHENKTLTFEKLHEIALGTASGISYLHEECQQRIIHYDIKPENILLDHNFNPKVADFGLAKLCNRENTHITMTGGKGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGKRRNLDVKLTESQEWFPRWVWIKFDSGELTELTREYGIGEKDKQIAERMVRTALWCVQYRPESRPLMSVVVKMLEGSVEIPEPLNPFQYMMDGGFLPHLSQATPSDTSFGSSSTQTVSGSNIVRATPIMSKYEIEITSCQD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1407 428 SUPERFAMILY Protein kinase-like (PK-like) 69 362 IPR011009 -
Dere14g1407 428 Gene3D Phosphorylase Kinase; domain 1 63 167 - -
Dere14g1407 428 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Dere14g1407 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Dere14g1407 428 Gene3D Transferase(Phosphotransferase) domain 1 168 369 - -
Dere14g1407 428 ProSiteProfiles Protein kinase domain profile. 90 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1407 428 SMART serkin_6 90 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1407 428 Pfam Protein kinase domain 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1407 428 FunFam serine/threonine-protein kinase PBS1-like 60 167 - -
Dere14g1407 428 PANTHER OS07G0415500 PROTEIN 14 373 - -
Dere14g1407 428 FunFam Putative receptor-like protein kinase 168 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1407 Dere-ChrDere14 14441682 14442968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1407 79 399 Receptor kinase-like Gene Family AT5G38280 40.426 1.68e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Dere14g1407 Pkinase 1.8e-47 CL0016