Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1404 ATGGAAGAAAAAAGAGAACTTGTCTATGAAATATCTAAGTGGTCACATGGTGCATCTGAGATGTTACAGACATGGAGTCGACAAGAGATTTTGAAAATCCTGTGTGCAGAAATGGGAAAAGAAAGAAAGTACACTGGCTTGACAAAGTTGAAAATTATAGAAAATCTTCTAAAAATTGTCTCAGAAAAGAAATCAGGAGGCCAGGAAATCGGAATAGACCTTGAACCACTTTCTTCTCCTGCACATGGCCAGAAACCTGCTAAAAGGCAGAGGAAAACAGAGAATCCATCTCGATTACCTCTTCCAGCAAACAATAGTCCGGCCACTAATGGTGGTGGGGATTTAGGTAGTAGTAGTACCACATACTGTAAAAATTCAGCTTGCAAAGCTACCCTGAGTCAAGCAGATGCATTTTGCAAAAGATGCTCGTGTTGCATCTGTCATCGATATGATGACAATAAAGATCCAAGCCTGTGGTTAATATGCAACTCTGAGCCCCCATTTCTTGGTATTTCTTGTGGCTTGTCATGCCATCTTGAGTGTGCCTTAAAACATGATGGTTCTGGCATTGCTAAAGATGGAGAGCGTCCCAAGGTTGACGGAGGCTTTTACTGCATCTCATGTGGGAAAATAAATGATTTGCTTGGATGCTGTAGAAAACAACTGATGGTGGCAAAGGATACCAGACGCGTGGACATACTCTGCTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGGACTGAAAAATATAAAAAACTTTATGAAATTATCGATGAAGCTGTAAAGAAACTTGAACCTGATGTTGGCCCATTGACTGGCTCACCGGCGAAGATTGGTAGGGGTATTGTGAACAGACTTTCATCTGGGCCAGAGGTTCAGAAACTTTGTGGTTTTGCTTTGGAATCACTGGATTCATCACTTTCAAAATTTATGTTGCCTCCATCACCCAGTCCTACAATTCAAGATGCAAAATTGATTGCTCCAAATATGGTGGGGTTTGAAGATGTCACTGCAACGTCCCTCACTGTTGTGTTGGGTTCTGAAGATCCTTCTGGGGAAAGCATTGTTGGTTACACCTTGTGGCATCGCAATGCTCATGATGTAAACCATCCATTAGACCCAACTTGCACATTGCTTCTGCCAGACAGAAGGTTCAGTATCAGGACTCTAACTCCAGCCACAGAATACATTTTTAAGGTTGTTGCTTTCAATGATTCGAGGGAGTTGGGCATGTGTGAAGTTCATGTTTCAACCGAGCATGGTGAAGAAGAAGCACCCAACTGCTCAGCAACAGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCTTTCTAATCCTTCTTCCGTGGAAGATGAAACTAATAACAGCAATCCATATAGTGATCAGGCTGATAATCGAGAAGACAATTATCTTCCTTATCACAAGGACACTGACAAGCTTGCTTCTGGAATTTTATCCCATGATGCTGTTAATTGTTCCAACATAGGTGAAGATAGACTGCCAACAGATGCGGATTCTTTGTCAGACAAGGAAAATGCTGTAGGAATGGCTGGCACTATACCTGTTTCTGACGGGCTGAAGCTTGAGAACAAGCACTCACCTGAGGAGCAAGTCACTGAGGACATGAGCACTGATGATGGGCTTAATTCCCCAGCTCAGACTGGGAGGGAGAGTGTGCCGTTGGTAGGTAGCTCAGAAGCAGGCCTTCCTATTACTCCGTGCAAGTTGGACATGTTAAAGGATGGGCTGGGAAGAAACGGGAGGTCTAAATTGAGTGGCAAGGATCAAGAAAATGGTTCTGGGAAGAGACAAGGCCCCCAAGATGGAAGCACGTCTAAGAAAAGCGGGGAAAGGCAAGTTGAGGCTTGTGCTGCCGATGGGTTCTCTGATAGGGATTTTGAATATTATGTGAAAGTGATTAGATGGCTAGAGTGTGAAGGACACATAGAGAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTGAGAGCAACACCCCAAGAAGTAAGGGTAGTCAAAGTATATATTGATACCTTTCTTGAAGATCCAGCATCTCTTGCTGAGCAGCTTGTGGACACCTTCTCAGACTGTATATCAAGCAAGAGAACATCTATGGTGCCGGCTGGGTTCTGCATGAAGCTTTGGCATTAA 2160 0.4356 MEEKRELVYEISKWSHGASEMLQTWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGQEIGIDLEPLSSPAHGQKPAKRQRKTENPSRLPLPANNSPATNGGGDLGSSSTTYCKNSACKATLSQADAFCKRCSCCICHRYDDNKDPSLWLICNSEPPFLGISCGLSCHLECALKHDGSGIAKDGERPKVDGGFYCISCGKINDLLGCCRKQLMVAKDTRRVDILCYRVSLSQRLLQGTEKYKKLYEIIDEAVKKLEPDVGPLTGSPAKIGRGIVNRLSSGPEVQKLCGFALESLDSSLSKFMLPPSPSPTIQDAKLIAPNMVGFEDVTATSLTVVLGSEDPSGESIVGYTLWHRNAHDVNHPLDPTCTLLLPDRRFSIRTLTPATEYIFKVVAFNDSRELGMCEVHVSTEHGEEEAPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQADNREDNYLPYHKDTDKLASGILSHDAVNCSNIGEDRLPTDADSLSDKENAVGMAGTIPVSDGLKLENKHSPEEQVTEDMSTDDGLNSPAQTGRESVPLVGSSEAGLPITPCKLDMLKDGLGRNGRSKLSGKDQENGSGKRQGPQDGSTSKKSGERQVEACAADGFSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRVVKVYIDTFLEDPASLAEQLVDTFSDCISSKRTSMVPAGFCMKLWH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1404 719 MobiDBLite consensus disorder prediction 545 562 - -
Dere14g1404 719 MobiDBLite consensus disorder prediction 429 466 - -
Dere14g1404 719 MobiDBLite consensus disorder prediction 600 619 - -
Dere14g1404 719 MobiDBLite consensus disorder prediction 97 111 - -
Dere14g1404 719 SUPERFAMILY Fibronectin type III 329 407 IPR036116 GO:0005515
Dere14g1404 719 ProSiteProfiles Fibronectin type-III domain profile. 328 424 IPR003961 GO:0005515
Dere14g1404 719 MobiDBLite consensus disorder prediction 526 569 - -
Dere14g1404 719 CDD PHD_VIN3_plant 143 208 - -
Dere14g1404 719 MobiDBLite consensus disorder prediction 70 111 - -
Dere14g1404 719 MobiDBLite consensus disorder prediction 420 471 - -
Dere14g1404 719 Pfam PHD - plant homeodomain finger protein 123 242 IPR032881 -
Dere14g1404 719 MobiDBLite consensus disorder prediction 587 621 - -
Dere14g1404 719 SMART FN3_2 326 411 IPR003961 GO:0005515
Dere14g1404 719 CDD FN3 328 406 IPR003961 GO:0005515
Dere14g1404 719 Gene3D Immunoglobulins 328 443 IPR013783 -
Dere14g1404 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 719 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1404 Dere-ChrDere14 14416037 14419638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1404 1 601 PHD Gene Family AT4G30200 47.792 1.02e-163 484