Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1381 ATGGGTCGAGCTCCATGCTGTGACAAAGCCAACGTGAAGAAAGGACCTTGGTCTCCAGAAGAGGATGCTATACTCAAAGCCTATATTGACAAACATGGAACTGGAGGCAACTGGATTGCTCTTCCTCAGAAAATTGGGCTGAAGAGGTGTGGGAAAAGTTGCAGACTAAGATGGTTAAATTACCTGAGGCCTAATATAAAGCATGGTGGATTTACCGAAGAAGAAGACAACATCATTAGCAGCCTCTACATTAGCATTGGAAGCAGGTGGTCCATTATTGCTGCTCAACTACCTGGAAGAACTGACAATGACATCAAAAACTATTGGAACACGAAGTTGAAGAAGAAACTACTTGGTAGGCGCAAAAAAGAAAACATAGATCAAGAGAACTCAAATAATTCAGATCAAACCCTAAGTAGCTCAGCTCTTGAAAGGCTTCAACTTCACATGCAACTTCAAAAGCCTAATTTCTCTTTCTTTGGCAATGCTACCCTATGGTCCAAGTTGCATCCTTTCCAACAAAAAATGATCCATAACACCTTAAAATCTGTGAACCCTACCTCCAATTTTACAACCAAACATAATGAATTTCACCAACCAAATTTTGCTAATAATATTGATGCAATTCAACTAGAAAGAGAGAAGACTAGTAGCCCAGAGAGCTTGGGTCCGATCATTGGTGCTAGGACTTATTCGGTGGACATGAGTCAAGTTGGGTTTGATATGGGAATTGATCGACTTTCTGAATTGCAAGCTGAGCTTGATGACATTCTCAACAACAATGATAGATCAAGAATGGGGGATTATGTAGCACAACTAGAAGAACAGATAGCTGAATATGATTGTTTTGGTGAGATGAATGTTTCATCAAATAACAATTTGACTTGGTGGTCTAACGATTTTGATGCCAAGTTAACATCCTCGAGCTCTTTGGATTCAACCATTGCCACCACTCTTCATGTTACTCAGCCAAAGAAGGGGATGTTTCAAGATTATGAACTAAGTTATATTTCGTAA 1017 0.3963 MGRAPCCDKANVKKGPWSPEEDAILKAYIDKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIISSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGRRKKENIDQENSNNSDQTLSSSALERLQLHMQLQKPNFSFFGNATLWSKLHPFQQKMIHNTLKSVNPTSNFTTKHNEFHQPNFANNIDAIQLEREKTSSPESLGPIIGARTYSVDMSQVGFDMGIDRLSELQAELDDILNNNDRSRMGDYVAQLEEQIAEYDCFGEMNVSSNNNLTWWSNDFDAKLTSSSSLDSTIATTLHVTQPKKGMFQDYELSYIS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1381 338 Gene3D - 70 142 - -
Dere14g1381 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Dere14g1381 338 SMART sant 67 115 IPR001005 -
Dere14g1381 338 SMART sant 13 64 IPR001005 -
Dere14g1381 338 FunFam Transcription factor RAX3 7 68 - -
Dere14g1381 338 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Dere14g1381 338 CDD SANT 71 111 IPR001005 -
Dere14g1381 338 FunFam Transcription factor MYB36 70 140 - -
Dere14g1381 338 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Dere14g1381 338 PANTHER OS09G0431300 PROTEIN 1 206 - -
Dere14g1381 338 Gene3D - 7 68 - -
Dere14g1381 338 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Dere14g1381 338 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Dere14g1381 338 CDD SANT 16 62 IPR001005 -
Dere14g1381 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Dere14g1381 338 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1381 Dere-ChrDere14 14164017 14166253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1381 1 179 MYB Transcription Factor Family AT5G57620 73.711 1.93e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g1381 Myb_DNA-binding 1.6e-13 CL0123