Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1365 ATGAGTTTTCAGCCTAATACCTCTCTTCACCTAAATCTACCGAACGACAATAATAATCTACTAAACCTAGATCTTCTCCTTGAGCCTTCCTCTTCTTCTGCTTCCTCGTGTTCACCTACAGGTTCCAGTTTCATGGGGCCTAGGATATTCTCATGCAATTATTGCCAGAGAAAGTTTTATAGCTCCCAAGCGCTAGGGGGTCACCAAAATGCCCACAAGCTTGAACGCACCCTCGCCAAGAAAAGCAGAGAGCTAATAAATAGTTCTTCCATCCAACCTTGTAATAATATTAATGGATCATCAGGAGGATCGGATCACCTGCACTGCCCCAGCTTCGGCAACTCGAACCGTCTTAGCCATCGGCTCGGGCCGGGTCTTGGGAGGTTCGTGAACCATGGTCAAGGTGGGAGGAGAGAGTTTGGCTATGGTTCCAAGGAAATTGTTCAGGAGGATATTAGCCAACTTGACCTCTCATTAAGGCTGTGA 486 0.4691 MSFQPNTSLHLNLPNDNNNLLNLDLLLEPSSSSASSCSPTGSSFMGPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELINSSSIQPCNNINGSSGGSDHLHCPSFGNSNRLSHRLGPGLGRFVNHGQGGRREFGYGSKEIVQEDISQLDLSLRL 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1365 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
Dere14g1365 161 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Dere14g1365 161 FunFam Zinc finger protein 2 27 96 - -
Dere14g1365 161 SUPERFAMILY beta-beta-alpha zinc fingers 46 77 IPR036236 -
Dere14g1365 161 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 119 IPR044246 GO:0009788
Dere14g1365 161 Gene3D Classic Zinc Finger 37 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1365 Dere-ChrDere14 14019228 14019713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1365 1 161 C2H2 Transcription Factor Family AT5G57520 49.153 3.34e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere14g1365 None None None