Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1355 ATGGGATCCACCCTCAGTTGCTGTGGTCCACGCAAGACCCAAGATGAAGCGCCGACAACCTTCGGTGGTGTCGTTGTGAACTCATGGAGAATATTCTCTTACAAGGAGTTGCATACTGCTACGAACGGCTTCAGTGAGGATAACAAGCTCGGTGAAGGTGGATTTGGAAGCGTCTATTGGGGCAAAACCAGTGATGGTCTCCAAATAGCGGTGAAGAAGCTGAAAGCGATGAACTCGAAGGCAGAGATGGAGTTTGCAGTGGAAGTGGAAGTGTTGGGGAGGGTTCGTCACAAGAACTTGCTAGGGCTTAGAGGGTACTGTGCTGGAGGGGCAGATCAAAGACTCATTGTGTACGATTACATGCCAAATCTGAGCCTTCTTTCTCATCTGCATGGCCAGTTTGCGGGTGAGGTCCAGCTCGACTGGAAAACGAGGTTCAAGATTGCCGTTGGCTCTGCAGAAGCCTTACTGTACTTGCACCACGAAGTCACACCCCACATAATCCACAGGGACATCAAGGCCAGCAATGTGCTTCTGAATTCAGAGTTCGAACCTCTCGTGGCAGATTTTGGGTTCGCAAAGCTAATCCCAGAAGGAGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGGTACTTAGCCCCGGAATATGCCATGTGGGGAAAGGTCTCTGAGAGCTGTGACGTGTACAGCTTTGGAATTCTTCTGCTAGAGCTCGTCACAGGAAGAAAGCCCATAGAGAAACTTCCAAGTGGGCTCAAGAGGACCATAACTGAATGGGCCGAGCCCATGATATCCAAAGGAAGGTTTAAGGATTTGGTGGACCCAAGGTTCAGAGGGAACTACGATGAAAATCAAGTGAAGCTAGCCATCAATGTGGCTGCTCTTTGTGTGCAAAATGAACCTGAGAAGCGACCCAATATGATGCAAGTGGTTAATTTTCTGAAGGGATGTGAACCTCAAGCCCGAGTGATGAAGACGAGGATACATAGTGTCAAGTATAAGGATGAATTATTGGGACTTGATCAAGCTAGTGATGATGATGACGATGATGAAGCTAATGGTTATGGTGTTTTTAGTGCCCTAGAGGTGCAAAAGATGCATAATCCTTACAAGCGTGAAAGGCACAAGAAAATGGCTGAACCAGCTTGA 1155 0.4805 MGSTLSCCGPRKTQDEAPTTFGGVVVNSWRIFSYKELHTATNGFSEDNKLGEGGFGSVYWGKTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGGADQRLIVYDYMPNLSLLSHLHGQFAGEVQLDWKTRFKIAVGSAEALLYLHHEVTPHIIHRDIKASNVLLNSEFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPSGLKRTITEWAEPMISKGRFKDLVDPRFRGNYDENQVKLAINVAALCVQNEPEKRPNMMQVVNFLKGCEPQARVMKTRIHSVKYKDELLGLDQASDDDDDDEANGYGVFSALEVQKMHNPYKRERHKKMAEPA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1355 384 Gene3D Phosphorylase Kinase; domain 1 17 120 - -
Dere14g1355 384 FunFam PTI1-like tyrosine-protein kinase At3g15890 121 333 - -
Dere14g1355 384 ProSiteProfiles Protein kinase domain profile. 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1355 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Dere14g1355 384 SMART serkin_6 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1355 384 CDD STKc_IRAK 50 318 - -
Dere14g1355 384 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Dere14g1355 384 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 120 - -
Dere14g1355 384 PANTHER OS01G0253100 PROTEIN 27 323 - -
Dere14g1355 384 Gene3D Transferase(Phosphotransferase) domain 1 121 338 - -
Dere14g1355 384 SUPERFAMILY Protein kinase-like (PK-like) 28 325 IPR011009 -
Dere14g1355 384 Pfam Protein tyrosine and serine/threonine kinase 47 316 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1355 Dere-ChrDere14 13875107 13877453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1355 32 316 Trihelix Transcription Factor Family AT1G70460 49.827 5.43e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Dere14g1355 PK_Tyr_Ser-Thr 3.9e-41 CL0016