Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1350 ATGGACTGGATGGAACAAGAACGAGAAAGAGGGATTACCATAACTTCCGCTGCAACCACTACATTTTGGGATAAGCACCAGATCAACATAATTGATAGTCCCGATCATGTTGACTTCACCCTAGAAGTGGAGCGAGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGATAGTGTTGCTGGTGTGGAACCACAATCGGAAACTGTTTGGAGACAAGCTGATAAATATGGGGTCCCACGAATTTAGCTGGCTTGGGATTATCGATCCCAGATGATAGAAACCATAGTTGAGTTGGATGATCAAGCTATGGAGAGCTACCTAGAAGGACATGAACCAGATGAAAAGACCATCAAAAAATTAATTAGGCAAGGAATCATATCAGGAAAATTTGTGCCGGTACTATGTGGCTCAGCTTTCAAAAATAAGGGGGTCCAACCATTACTTGATGCTGTTGTGGATTATCTGCCATCACCACTTGACTTGCCACCAATGAAAGGAACTGACCCTGAAAACCCAGAAGTGACACTTGAAAGAAAAGCAAGTGATGATGAACCATTTTCTGGACTAGCGTTTAAGATCATGAGCAATCCATTTGTTGGTTCCCTTACATTTGTCAGGGTGTACGCTAGAAAGCTTTTAGCAGGGTCTTATGTACTTAATGCAAACAAAGGGAAAAAGGAAAGAATTGGTAGACTACTAGAAATGCATGCGAACAGCAGGGAGGATGTTAAGGTAGCTTTAACGGGTGATATTATAGCTCTGGTAGGTTTAAAAGATACAATTACAGGTGAAACATTGTGTGACCCTGACAGTCCTATTGTGCTTGAGCGTATAGACTTTCCTGATCCTATGATAAAGGTTGCAATTGAACCCAAAACTAAAGCTGATGTTGACAAGATGGCCAATGGTTTAATTAAGCTTGCCCAAGAAGACCCTTCATTCCAATTCTCCAGGGATGAAGAGATTAACCAGACGGTGATTGAAAGAATGGGAGAATTGCATCTTGAAATCATTGTTGACCGACTCAAGAGAGAATTTAAGGTGGAAGCTAATGTTGGTGCACCCTAA 1071 0.4164 MDWMEQERERGITITSAATTTFWDKHQINIIDSPDHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRIXLAWDYRSQMIETIVELDDQAMESYLEGHEPDEKTIKKLIRQGIISGKFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPENPEVTLERKASDDEPFSGLAFKIMSNPFVGSLTFVRVYARKLLAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALVGLKDTITGETLCDPDSPIVLERIDFPDPMIKVAIEPKTKADVDKMANGLIKLAQEDPSFQFSRDEEINQTVIERMGELHLEIIVDRLKREFKVEANVGAP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1350 356 FunFam Elongation factor G 169 284 - -
Dere14g1350 356 CDD EFG_mtEFG_II 187 269 - -
Dere14g1350 356 SUPERFAMILY Translation proteins 141 281 IPR009000 -
Dere14g1350 356 Gene3D Elongation Factor G (Translational Gtpase), domain 3 283 356 - -
Dere14g1350 356 FunFam Elongation factor G 285 356 - -
Dere14g1350 356 PRINTS GTP-binding elongation factor signature 9 17 IPR000795 GO:0003924|GO:0005525
Dere14g1350 356 PRINTS GTP-binding elongation factor signature 45 56 IPR000795 GO:0003924|GO:0005525
Dere14g1350 356 PRINTS GTP-binding elongation factor signature 29 39 IPR000795 GO:0003924|GO:0005525
Dere14g1350 356 Gene3D - 54 83 IPR027417 -
Dere14g1350 356 CDD EFG_III 282 356 IPR009022 -
Dere14g1350 356 SUPERFAMILY EF-G C-terminal domain-like 279 356 IPR035647 -
Dere14g1350 356 Gene3D Translation factors 170 282 - -
Dere14g1350 356 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 160 IPR000795 GO:0003924|GO:0005525
Dere14g1350 356 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 2 17 IPR031157 -
Dere14g1350 356 Pfam Elongation factor Tu GTP binding domain 1 158 IPR000795 GO:0003924|GO:0005525
Dere14g1350 356 Pfam Elongation Factor G, domain III 281 354 IPR041095 -
Dere14g1350 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 158 IPR027417 -
Dere14g1350 356 Gene3D - 1 53 IPR027417 -
Dere14g1350 356 Gene3D - 86 169 IPR027417 -
Dere14g1350 356 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 86 356 - -
Dere14g1350 356 Pfam Elongation factor Tu domain 2 201 268 IPR004161 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1350 Dere-ChrDere14 13791315 13792607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1350 1 74 Eukaryotic Initiation Factors Gene Family AT3G22980 43.243 3.96e-14 72.0