Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1346 ATGGCAACCCCAAATCTTTATTACTATGGCTACCTTTTATCTTGTCTTCTTGTGTTGCTAATAGCTCAGTTTGGTGCAGGCGATCATGATGATGCAGTACTCCTGGGAGGGAAGAAGTTGATAATCGGTGTGCCTATGAAAGATGGTTTCACCGAATTTGTGGATGCACAACTGAGTCCGAATAATATGGAGCAGTTGGTGAAGGTTACAGGCTACTCCATTGAGGTCTTCAATGCTACAGTAGCTTATTTGAAGACTCTAGGTTACCTCGTTTCTTATGAGTTTCAAGCTTTCGCAGATGAAACTGGAAGGAGTGCTGGGTCCTACACCATGCTCCTGGATCAGATTCCTAAACACAAGTACGACGTCGTGGTGGGAGATGTCACAATAGTGGCAAATCGTTCAAATTATGTAGATTTTGCACTGCCATATGCGGAGACAGGTGTGAAGATGCTTGTAAAAGTTGGACATAATCGACATTTGAATATGTGGATTTTTCTAAAACCTTTTCGTGGGGATCTCTGGTTGACCATCGTCATTTTCTGTATATTTATTGGAGGTATTATACTTTTTATGGAACGTAACGTAAGCAGAGATGCAAGTTCTGAAAATTCACATCCTAGGGAACAGATTACCTGGGTATCACGCTTGTTCTTTTCTCTTGCGCATCTTGACAAATTGAAATATTTTGGAAGCAATGACGATCAACTTCAAGATCTAACAAACTCGTCATCAGACACTGCTACTACTCCTATCCTCACCTCGTACAGCTTCGCGGGCCTGTTCATGGTAATTGGATTTCTGATCTTGCTGGCTTTGCTGCTCTCTGAAACTAGTCATATTTGGAAGAAATCTGTTACTCTGGCAAGAACCGTTTGCAAAAGTTTGTTCACTCAACGTTCTGCAAGAAATGGTAACAGTAACACAAGGGAAAGTTCTACAGTGAGAGAAAATGTTGATGAAGGTTCTAGAAGGAGAGAAGATGTTGGCTCAGCAGAAGAAGCAAATAGCCATCGCGAATAA 1023 0.4154 MATPNLYYYGYLLSCLLVLLIAQFGAGDHDDAVLLGGKKLIIGVPMKDGFTEFVDAQLSPNNMEQLVKVTGYSIEVFNATVAYLKTLGYLVSYEFQAFADETGRSAGSYTMLLDQIPKHKYDVVVGDVTIVANRSNYVDFALPYAETGVKMLVKVGHNRHLNMWIFLKPFRGDLWLTIVIFCIFIGGIILFMERNVSRDASSENSHPREQITWVSRLFFSLAHLDKLKYFGSNDDQLQDLTNSSSDTATTPILTSYSFAGLFMVIGFLILLALLLSETSHIWKKSVTLARTVCKSLFTQRSARNGNSNTRESSTVRENVDEGSRRREDVGSAEEANSHRE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1346 340 Gene3D - 164 273 - -
Dere14g1346 340 Gene3D - 33 163 - -
Dere14g1346 340 MobiDBLite consensus disorder prediction 303 340 - -
Dere14g1346 340 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 211 IPR015683 -
Dere14g1346 340 Pfam Ligated ion channel L-glutamate- and glycine-binding site 63 155 IPR019594 GO:0004970|GO:0016020
Dere14g1346 340 SMART GluR_14 39 284 IPR001320 GO:0015276|GO:0016020
Dere14g1346 340 MobiDBLite consensus disorder prediction 314 340 - -
Dere14g1346 340 SUPERFAMILY Periplasmic binding protein-like II 12 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1346 Dere-ChrDere14 13621476 13624543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1346 37 227 Ion Channels AT2G29120 41.969 7.66e-37 139