Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1345 ATGGCAAAACCAAAAGATTGCTATGGCTTCCTTATTGTTTCTTTTTTTATCTTGTTAATAGCTCAGTTTGGTGCAGGTGATGCAGTTTCACTCCTGGGTGGGAAGAAGTTGATAATTGGCGTTCCTAAGAAATCTGGCTTCACCCAGTTTGTCGATGCACAACTGAGTTCTAGTAATAAGACGCAGTTGGTGCAGGCTACCGGCTATTCTATTGACGTTTTCAATGCTACAATAGCTTTTCTTCAGCGTTCAGGTCACAATATTTCTTTCGAGTTTAGAGCTTTCGTAAACGAACATGGAAACAGTGCTGGGAATTACGACACACTCATATACCAGATTTTTAATCAAACGTACGATGCTGTGGTGGGAGATGTGACAATCGTGGCAAATCGGTCGAACTACGTAGGTTTTACACTACCATATACGGAATCTGGAGTAAGGATGCTTGTAAAAGTTCGACATGATCCACGCTTGAATATGTGGATTTTTGCACGGCCTTTTAGCTGGGATTTGTGGTTGTCCATCGCCATCGTGTGTATTTTTATAGGAGGTATCATACGGTTCATGGAACGTAATGTAAAGGAAGATTCAGGACTCGAAAATTCAGCACGCAGGGAACAGTTGACTGGGGTTTCTATCCTGTGGCTTGCTGTGGTGCAAGCAGTCTTCCCTGAAAGAGAATCACTGGCCAAGAACTGCTCTAGGTTTGTGTTGGTGATGTGGTTGATATTAGCATTTGTCCTCATGCAAAGTTACACAGCATGCTTGTCATCAATATTGACAGTACATCAGTTGCAACCTAATTACCCTAGTGAAAATGATCTTAGAAGAGACCCCACAATTAACGTTGGATACCAGAGTGACTCCTTTGTCAGAGATGTATTGGTTGACCGCTTGAAGTTTGATGAAACAAAGCTGAAGAATTACTCCACCATTGAACAATATCGGGATGCTTTAGATAAAGGAAGCCTCAAAGGTGGTGTTGATGCTATTTTTGACGAAGTTCCCTTCATTAAGGTCTTCCTCAAGGAATACGCTTCCAATTATGCCATGGTCGGAACTAGGCACCGTACGGATGGATTTGGTTTTGCATTTCCCAAAGGCTCCAATTTAACCGAGTACTTTTCCAGAGCTGTATTAAATGTAAGTGAGAGTGATGTAATGGACTTGATTGAACAGAAATACTTTGGAATCAGTGACGATGAACTCGAAGACCAATCTAATTCGTCCTCAGATGCCAGTCCCAGCCTCACAGCTTATAGCTTTACAGGTTTGTTCATGGTGATTGGAATTCTTTCATTGTTGGCTTTGTTAGTCTCTGAAACTCGTATTTGGCGAAAACCCATTATGCTGGCAAAAACTTATAGCCAAAACTTCTTGACTCGGAGTTCTACAAGAACTATTCAATCAGGAGAAGGTTCTAGTTCTACAAGAAGACAAAATATTGGCTCGACAGATGGAGGAGATAACCATCCAAAAATCCTACGAGATCTCTTTCCTGAGTAG 1506 0.4157 MAKPKDCYGFLIVSFFILLIAQFGAGDAVSLLGGKKLIIGVPKKSGFTQFVDAQLSSSNKTQLVQATGYSIDVFNATIAFLQRSGHNISFEFRAFVNEHGNSAGNYDTLIYQIFNQTYDAVVGDVTIVANRSNYVGFTLPYTESGVRMLVKVRHDPRLNMWIFARPFSWDLWLSIAIVCIFIGGIIRFMERNVKEDSGLENSARREQLTGVSILWLAVVQAVFPERESLAKNCSRFVLVMWLILAFVLMQSYTACLSSILTVHQLQPNYPSENDLRRDPTINVGYQSDSFVRDVLVDRLKFDETKLKNYSTIEQYRDALDKGSLKGGVDAIFDEVPFIKVFLKEYASNYAMVGTRHRTDGFGFAFPKGSNLTEYFSRAVLNVSESDVMDLIEQKYFGISDDELEDQSNSSSDASPSLTAYSFTGLFMVIGILSLLALLVSETRIWRKPIMLAKTYSQNFLTRSSTRTIQSGEGSSSTRRQNIGSTDGGDNHPKILRDLFPE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1345 501 CDD GluR_Plant 35 396 - -
Dere14g1345 501 Gene3D - 161 294 - -
Dere14g1345 501 Gene3D - 313 362 - -
Dere14g1345 501 Gene3D - 363 396 - -
Dere14g1345 501 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 447 IPR015683 -
Dere14g1345 501 MobiDBLite consensus disorder prediction 466 501 - -
Dere14g1345 501 Pfam Bacterial extracellular solute-binding proteins, family 3 65 397 IPR001638 -
Dere14g1345 501 SMART GluR_14 36 398 IPR001320 GO:0015276|GO:0016020
Dere14g1345 501 Gene3D - 29 160 - -
Dere14g1345 501 Pfam Ligand-gated ion channel 398 431 IPR001320 GO:0015276|GO:0016020
Dere14g1345 501 MobiDBLite consensus disorder prediction 466 487 - -
Dere14g1345 501 FunFam Glutamate receptor 33 157 - -
Dere14g1345 501 SUPERFAMILY Periplasmic binding protein-like II 15 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1345 Dere-ChrDere14 13598802 13602656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1345 34 439 Ion Channels AT5G11210 36.430 2.59e-83 273