Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1344 ATGAAATCAGATGGCCAAGTTCTTGAGGTGCCTTCTCTTGCTTCTTCTGCTACAGAATATACGAACTGGGAGAGGGTCAAGTGCCACAGACGAATTACCTTTCTCCCCCATTTGCTGGTCGACGCTGTGGTGGGAGATGTGACTATTGTGGCAAATCGGTCGAACTACGTGGATTTTACACTACCATATGCAGAGTCGGACGTGAAGATGCTTGTGAAAGTTAGACACGATCCACGCTTGAATATGTGGGTTTTTCTACGGCCTTTTAGTTGGGATTTGTGGTTGTCCATCGCCATCGTGTGTATTCTCATAGGAGGCACCATACGGTTCATGGAACGTAATGTAAAGAAAGATGCAGAACTTGAAAATTCAACACGTAGAGAACACTACTTCACTGGGGTTTCTATCCTCTGGCTTCCTGTAGTGCAAGCAGTCTTTCCTAAAAGAGAATCATTGGCCAAGAATTGCTCAAGGTTTGTGTTGGTGATGTGGTTGATATTAGCATATGTCCTCATGCAAAGTTACACAGCAAGCTTGTCATCAATCTTGACAATACATCAGTTGCAACCTCGTTACCCTAGTGAGAATGATGTTGTAAGAGACCCAAAAATTAATGTTGGATACCAGCGTGGCTCATTTGTCAGAGACGTATTGGTTGATCGCTTGAAGTTTAACGAATCAAGGCTGAAGAAGTACACCACTATTGAAGAATATTGGGACGCTTTAGATAAAGGAAGCCAAAAAGGTGGTGTTGATGCTATTTTTGACGAAGTTTGGTTCATTAAGATCTTCCTCAAGGAATATGGTTCCGATTATGTCATGGTCGGAACTAGGCACCGCACCGATGGATTTGGTTTTGCATTCCCGAAGGGCTCCAATTTAACCGAGCACTTTTCTAGAGCTGTCTTAAATGTAAGTCAGAGTGAAGACATGGATTTGATTGAAAAAAAATATTTTCGAAGCAGTGACGATGAACTCCAAGGCCAATCTAATTCGTCGTCTGCCAGTCCCAGCCTCACTGCTTATAGCTTTACAGGTTTGTTCGTGGTAATTGGAATTCTTTCACTGTTAGCTTTGCTAGTCTCTGAAAGTCGTATTTGGCGAAAACCCATTATGCTGGCAAAAACATATAGCCAAAAATTCTTGACTCGGAGCTCTACAAGAACGTCTAGTCAATCAGGGGATGGTTCTAGTTCTACAACAAGAGCAAATATTGAAGGTTTTACAATTAGAAGAAACATTGGCTCGGCAGACGGTGGAGATAACCATCCAAGAGTCCCTACGAGATCACTTTCCTGCACAGATTTTGAAACATTGCCTGTGTGA 1326 0.4261 MKSDGQVLEVPSLASSATEYTNWERVKCHRRITFLPHLLVDAVVGDVTIVANRSNYVDFTLPYAESDVKMLVKVRHDPRLNMWVFLRPFSWDLWLSIAIVCILIGGTIRFMERNVKKDAELENSTRREHYFTGVSILWLPVVQAVFPKRESLAKNCSRFVLVMWLILAYVLMQSYTASLSSILTIHQLQPRYPSENDVVRDPKINVGYQRGSFVRDVLVDRLKFNESRLKKYTTIEEYWDALDKGSQKGGVDAIFDEVWFIKIFLKEYGSDYVMVGTRHRTDGFGFAFPKGSNLTEHFSRAVLNVSQSEDMDLIEKKYFRSSDDELQGQSNSSSASPSLTAYSFTGLFVVIGILSLLALLVSESRIWRKPIMLAKTYSQKFLTRSSTRTSSQSGDGSSSTTRANIEGFTIRRNIGSADGGDNHPRVPTRSLSCTDFETLPV 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1344 441 Gene3D - 38 83 - -
Dere14g1344 441 Pfam Ligand-gated ion channel 321 353 IPR001320 GO:0015276|GO:0016020
Dere14g1344 441 Pfam Bacterial extracellular solute-binding proteins, family 3 27 320 IPR001638 -
Dere14g1344 441 Gene3D - 221 322 - -
Dere14g1344 441 Gene3D - 84 220 - -
Dere14g1344 441 SMART GluR_14 7 321 IPR001320 GO:0015276|GO:0016020
Dere14g1344 441 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 369 IPR015683 -
Dere14g1344 441 SUPERFAMILY Periplasmic binding protein-like II 40 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1344 Dere-ChrDere14 13584475 13588445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1344 41 361 Ion Channels AT2G29120 43.925 1.65e-69 235