Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1343 ATGGATTGTATGCAAGGCATCTTGGGCGTAAGGCTAATGGTGGACAAAACTAAAAGCCTTGAAATTTTCAAGAATAGATGGAAAGCTTCGTCAATAAAAGCTACTAATGAGACTGGGTCCCCCTTAACCTTGTTTGGATTTTGGGCTTATGACACAGTTTGGGCGTTAGCCATAGTAGTGGAGGCTAAATTGGCAAATTCTACTCAAAATGTCACTCTTCTAGACACAATCCTAGCTACTAAATTTCAAGGCCTTTCTAGTTATGTTCGCGATGGTAAGGGCGATGGAACCAGGATTCTTCCAAACAATTGTTTGTCATGTCTTGCATCGACCATCCCTTCAATTGAAAAAAGGAGATCATCAAGTTCTAGTCCTCCTAATGCAAGGAAGAAGGCTCCTATTAAACTACCCTTTAAATGGAGGGAAGGACATGGCAATGCTACCCTACGTAGTAGCTTCCATCAGAAGAACAGTAACTTCACATATTCTAAACTATCCAAATCTTCAAGCTCAGTTGCTTTGCCAAGTTCAACATGTAGCACTTCATGTCAACTGAAGAGACATCTTCTCACAACAGGATGGAGTTTGTTTGTAGGCTCAAAAAGGCTTAAAGTTGGAGATGTTGTTCTTTTTATCAGGCGTGCTAATCGTCAACAGACAAAATTGCCTTCATCTATCCTTTCTGTTGATAGCATGCATATTGGTGTGCTTGCTATTGCAGCTCATGCGCTGCTACTAATTAGAGCCCATTCACTATTTTCTACAACCCAAGAATTTGTTATTCCACTAGCTAAATACAGAAAAGTTGTATATGGTACCCAACTCTTAGTTGGCTTGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATATATGGGCACAATAGTTGGTATCAGCTACTTGGATCCTTTAAGGTGGCCTGGTTCCAAGTGGAGAAATATTCAGGTGGAATGGGATGAGCCAAGGTCTGAAATGACCATTTCAATCTGGATCTTTGCGCCATTTATACAAGTTCTTGAAAATGCAAATGTGGAGCTTTCAAATTCTATATCAAATCTATACTTGGAACACCTGATGAAAGTTCTTTTTAAACCTCAACTTGTTAACAATCTTGAAGCCTTTCCATCAACCATCCAGCAAGAATCTTCTGCTAAGAGTGATCCTTTAGAGGAGTTGAAGACCACACTAACAACAGAAAACCAAAATGCTCGTTTTACATGTTCAGGGAACATACTGCCTAAAAGTTTAGATCATTCTCAATCCGTCCCAGGCCAATCTAATGCCTTAAACTTGCATTCTGTGTTGAAAAGTGATCAAGCTGGAAAATTGCATCCTCTGCCCAAAATTGAGAATGCTCAATCCTCTAGAGCAGTTTCTGATAAGATAAAATTAGAACTTATAGATTTAACTGATCATATAATTGACTTACCTTTTATGGATGGTTGCAACATGGAAAAAGTGGTGGCTAACCTTGTGAATTCACTAGGCCATGCAAGCCAATTGATGTTTCTTAACCAAAACCAGAGCCTATGGCCCACGCAGCCTCAGTTTGAATCATCAATATCTCTTTCTCAATTGGTTGATATTCCTCAATCTGATTACAGTATTTTAAATGGCCTACTTCCTCGACCTGACCTTGATGAATGGATGTTGTATTCTTCTTGCCAACCTTTTGCTAGAATAAGCAGATCAACTGGGCCTTTGTCAACTTTACAAGAATAG 1734 0.395 MDCMQGILGVRLMVDKTKSLEIFKNRWKASSIKATNETGSPLTLFGFWAYDTVWALAIVVEAKLANSTQNVTLLDTILATKFQGLSSYVRDGKGDGTRILPNNCLSCLASTIPSIEKRRSSSSSPPNARKKAPIKLPFKWREGHGNATLRSSFHQKNSNFTYSKLSKSSSSVALPSSTCSTSCQLKRHLLTTGWSLFVGSKRLKVGDVVLFIRRANRQQTKLPSSILSVDSMHIGVLAIAAHALLLIRAHSLFSTTQEFVIPLAKYRKVVYGTQLLVGLRFGMMFETEESGKRRYMGTIVGISYLDPLRWPGSKWRNIQVEWDEPRSEMTISIWIFAPFIQVLENANVELSNSISNLYLEHLMKVLFKPQLVNNLEAFPSTIQQESSAKSDPLEELKTTLTTENQNARFTCSGNILPKSLDHSQSVPGQSNALNLHSVLKSDQAGKLHPLPKIENAQSSRAVSDKIKLELIDLTDHIIDLPFMDGCNMEKVVANLVNSLGHASQLMFLNQNQSLWPTQPQFESSISLSQLVDIPQSDYSILNGLLPRPDLDEWMLYSSCQPFARISRSTGPLSTLQE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1343 577 FunFam Auxin response factor 274 342 - -
Dere14g1343 577 Gene3D - 274 342 - -
Dere14g1343 577 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 184 442 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dere14g1343 577 SUPERFAMILY DNA-binding pseudobarrel domain 186 217 IPR015300 -
Dere14g1343 577 Coils Coil 340 360 - -
Dere14g1343 577 Gene3D - 114 222 IPR015300 -
Dere14g1343 577 SUPERFAMILY Periplasmic binding protein-like I 3 90 IPR028082 -
Dere14g1343 577 Gene3D - 13 99 - -
Dere14g1343 577 Pfam Auxin response factor 256 319 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1343 Dere-ChrDere14 13569406 13574909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1343 184 384 B3 DNA Binding Superfamily AT1G19850 51.562 2.23e-63 222