Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1336 ATGCTCTCGAGATCTTACTTAGACTTGTTGAATTTGGTCTCCGTCGATGACTACCGAACTCTGAGTCGAATTCCCAAGGACATGACGGTCCCCGGAGATATTCCCGAATCCGAGGGCCGCCACGATGCCGATTCTGCGTCCGGTCCCGACGACACCGTCTCCTCTGTTCCGCAAGAACGCAGAATCGTCGTCGCCAATCAGCTACCCATAAAATCCACACGCGACAACGCGACCAAGAAATGGAGTTTCGAATTGGACAGTGATAGTCTCGCTCTACAGCTCAAAGACGGGTTTCCCTCCGACGTCGAAGTTCTCTATGTGGGTTCTTTGAAAGCCGACATCGATTCATCGGAACAAGACGAAGTGTCCCAAATCTTGTTCAACAAGTTCCGATGTGTACCAACGTTTTTACCCCTCGAGATTCATAATATGTACTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTGCCTATGTCGCCGAGCCACGGCGCGCGTTTCGAACGCGCGCAGTGGCAAGCTTACGTTTTGGCCAACAAGATTTTCGCTGATAAGGTAACGGAGGTGATAAACCCAGACGAGGATTACGTTTGGGTCCATGATTATCATCTCATGATCTTGCCTACCTTATTGAGAAAACGGTTTCCCAGGGTCAAACTCGGGTTTTTTCTTCATAACGTATTTCCGTCTTCCGAAATCTATAGAACAATTCCAGTCCGTGATGAAATCCTTCGGGCTCTGTTAAATTGCGATTTACTCGGATTCCACACGTTTGATTACGCGAGACATTTCTTGTCGTGTTGTAGTAGGATGTTGGGGTTGGATTATGAGTCCAAAAGGGGTTACATTGGGCTAGATTATTACGGTCGAACCGTGACGATTAAGATCTTGCCGGTTGGGATTCACATGGGTCAGCTCCAATCGGTGTTGTCGTTTCCTCAGACCGGTGATAGGATTAAAGAATTAAAGAAACAATATGAGGGGAAGATTGTTATTTTGGGTGTGGACGATATGGATTTGTTCAAAGGTATAAGCTTGAAGTTCTTGGCAATGGGACAACTCTTGGAAGTGCACGAAGAGTTAAGGGGTAAAGTGGTTTTAGTCCAGATTCTGAACCCAGCAAGAAGCAGAGGGAAAGATATACAAGACGTTCAAAACGAGACCAATTCTATAGCGAAGGAGATAAACGAGAAATACGGTGAACCAGGATACCAGCCAATTGTGTTCATAAACGGCCCTGTTTCGACGCAGGAGAAAGCCTCGTACTACGCCATTTCTGAATGCTGCGTTGTGAATGCTGTGCGAGATGGTATGAATTTAGTGCCTTATACGTACACTGTTTGTAGACAGGGGATCGATAGTAATGATTCGGCAAGTCCTAAACGAAGCGTCATTATAGTGTCTGAATTCATCGGTTGTTCTCCATCTCTGAGTGGGGCAATCAGAGTGAACCCGTGGAACATAGAAGACGTCTCAGAGGCGATGAATACGGCGATTACGATGTCAGAGGCAGAGAAACAATTGCGTCATGAGAAGCATTATAAGTACATAAGCTCGCACGATGTAGCCTATTGGGCTAGAAGTTTCGATCAGGACTTAGAGAGGGCTTGTAGAGAGCATTACCTAAAGAGGTATTGGGGTGTTGGTTTGGGCTTGGGGTTTAGAATTGTTGCTCTCGATCCTACGTTCAGGAAGCTTTCAGTGGGCGTTCTGTCTGCTTATAGAAATACACAGAGCAGGTTGATCCTTTTGGACTATGATGGTACTATGATGCCCCAGAACTCGGTTAACAAAACCCCCAGCGACGAGGTTATTTCTGTGTTGGATTGCTTATGTAGTGACCCCAAAAACATAGTGTTTATCGTTAGTGGCAGAGACAAGAATTGCCTCAGCAAGTGGTTTTCTCCATGCGGGAAGTTGGGTCTCTCAGCAGAACATGGCTTCTTTACTAGGTGGAATAAGGATTGTCCTTGGGAGACGTGTGGGTTAGCATTGGACTTTGATTGGAAGAAGATTGTAGAACCAGTCATGGCGCTTTATACAGAAGCAACTGATGGTTCTTTCATTGAGCATAAGGAGAGTGCTTTGGTTTGGCATCACCAAGAAGCCGACCCTCATTTTGGATCGTGCCAAGCAAAAGAACTTCTTGATCACCTCGAGAGTGTGCTTGCCAATGAACCAGTAGTGGTCAAAAGAGGACAGCACATCGTTGAAGTGAAACCTCAGGGTGTGAGCAAAGGCATAGTTGTGGAAAACCTAATCTCAACGATGATAAGTAATGGGAAGGCGCCAGATTTTCTTCTGTGCATAGGTGATGATAGGTCAGATGAAGATATGTTTGAGAGCATTGCTCGTTCAGCTTCTGATCCAACCCAACCAACCATAGCAGAAGTCTATGCCTGCACTGTGGGGCAGAAGCCAAGCAGGGCAAAGTACTATCTGGATGACACATTTGAAGTCATCAAGTTGCTTCAAGGACTAGCTACTGTATCATCATCATCATCATCCACATAG 2529 0.4595 MLSRSYLDLLNLVSVDDYRTLSRIPKDMTVPGDIPESEGRHDADSASGPDDTVSSVPQERRIVVANQLPIKSTRDNATKKWSFELDSDSLALQLKDGFPSDVEVLYVGSLKADIDSSEQDEVSQILFNKFRCVPTFLPLEIHNMYYHGFCKHYLWPLFHYMLPMSPSHGARFERAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTLLRKRFPRVKLGFFLHNVFPSSEIYRTIPVRDEILRALLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSVLSFPQTGDRIKELKKQYEGKIVILGVDDMDLFKGISLKFLAMGQLLEVHEELRGKVVLVQILNPARSRGKDIQDVQNETNSIAKEINEKYGEPGYQPIVFINGPVSTQEKASYYAISECCVVNAVRDGMNLVPYTYTVCRQGIDSNDSASPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVSEAMNTAITMSEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRYWGVGLGLGFRIVALDPTFRKLSVGVLSAYRNTQSRLILLDYDGTMMPQNSVNKTPSDEVISVLDCLCSDPKNIVFIVSGRDKNCLSKWFSPCGKLGLSAEHGFFTRWNKDCPWETCGLALDFDWKKIVEPVMALYTEATDGSFIEHKESALVWHHQEADPHFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMISNGKAPDFLLCIGDDRSDEDMFESIARSASDPTQPTIAEVYACTVGQKPSRAKYYLDDTFEVIKLLQGLATVSSSSSST 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1336 842 NCBIfam HAD-IIB family hydrolase 586 787 IPR006379 -
Dere14g1336 842 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 543 - -
Dere14g1336 842 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Dere14g1336 842 MobiDBLite consensus disorder prediction 33 47 - -
Dere14g1336 842 Gene3D - 584 701 IPR023214 -
Dere14g1336 842 Gene3D - 714 842 IPR023214 -
Dere14g1336 842 FunFam Alpha,alpha-trehalose-phosphate synthase 314 523 - -
Dere14g1336 842 Gene3D Glycogen Phosphorylase B; 53 312 - -
Dere14g1336 842 MobiDBLite consensus disorder prediction 25 58 - -
Dere14g1336 842 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 47 833 IPR001830 GO:0003824|GO:0005992
Dere14g1336 842 NCBIfam trehalose-phosphatase 584 833 IPR003337 GO:0003824|GO:0005992
Dere14g1336 842 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 584 701 - -
Dere14g1336 842 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 714 842 - -
Dere14g1336 842 Pfam Glycosyltransferase family 20 60 539 IPR001830 GO:0003824|GO:0005992
Dere14g1336 842 CDD GT20_TPS 60 539 IPR001830 GO:0003824|GO:0005992
Dere14g1336 842 Pfam Trehalose-phosphatase 588 821 IPR003337 GO:0003824|GO:0005992
Dere14g1336 842 Gene3D Glycogen Phosphorylase B; 313 523 - -
Dere14g1336 842 CDD HAD_TPP 586 827 - -
Dere14g1336 842 SUPERFAMILY HAD-like 585 833 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1336 Dere-ChrDere14 13474466 13477349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1336 1 839 Trehalose Biosynthesis Gene Families AT2G18700 66.863 0.0 1181