Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1333 ATGCCTCCTCCTTCTCGTCCTCCTGCTTTTATTTCCCACCATGACCAAACCCAACCAAAGCCAAGCCCCAAGGTTCTTTCCCTCCTCCTTAAAGCCATAATCATGACGGTTCTCACCTCCGTTTTCTTCCTCTTTCTCGGCTTCGCCGCCTTCGTCCTGCTCCACCTCTGTTTCATCGGCGGCGTTCTCCACCGCCTCCGCTCCCGCCCCACTACCCAACTCGGAGCTTCCTCAAATGGGATCGCGGCTCGTGACGTAAAGAAGCTTCCCCACTTTCGGGTCGCCAGCGGAAACGAACCGGGTTCCGAAACCCAGTGTGTCGTGTGCCTGGACGGCTTCCGGAGCGGCCACTGGTGCAGAAAGCTCGCCGGATGTGGCCACGTGTTTCACCGGAGATGTGTGGATATGTGGTTGGTGAAGGTAGCCGCGTGTCCTACGTGCAGGACACCTGTTCGATTAGATGCTTGGGACTTAGGCTCGGCTCTGGAAGTCGAAAGAGAGGAGGCTAAGCGATTTCGGACGTGCGGTAGGAGCAGTGCTTTGAGGATTTTTTAA 555 0.5658 MPPPSRPPAFISHHDQTQPKPSPKVLSLLLKAIIMTVLTSVFFLFLGFAAFVLLHLCFIGGVLHRLRSRPTTQLGASSNGIAARDVKKLPHFRVASGNEPGSETQCVVCLDGFRSGHWCRKLAGCGHVFHRRCVDMWLVKVAACPTCRTPVRLDAWDLGSALEVEREEAKRFRTCGRSSALRIF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1333 184 MobiDBLite consensus disorder prediction 1 21 - -
Dere14g1333 184 Pfam Ring finger domain 105 148 IPR001841 -
Dere14g1333 184 SUPERFAMILY RING/U-box 101 154 - -
Dere14g1333 184 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Dere14g1333 184 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 14 161 - -
Dere14g1333 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 155 IPR013083 -
Dere14g1333 184 SMART ring_2 106 147 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1333 20 183 C3H Transcription Factor Family AT2G18670 43.023 2.09e-31 110