Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1326 ATGGCTTTCGAGCTGCAAGTATCACTGGGGCCGAATCAGAACCCCGTTGACGGTGAAACTGACGGAACAACTAACGGCGTCGATCATCGGCCGTCTTCCACCGACGGTGGAGATGATGGCAGCAAAGCGCCGAGACTGCCTCGATGGACAAGACAGGAGATTCTCGTTCTTATACAGGGCAAGAGAGACGCAGAGAACCGGTTTCGGAGGGGTCGCACAGCAGGATTGCCGTTCGGGTCGGGTCAGATAGAGCCGAAATGGGCATCGGTTTCATCCTACTGCAAAAAGCATGGAGTGAACAGAGGACCGGTACAGTGTCGTAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATAAAAGAATGGGAGTCTCATATAAGGGAAGAATCGGAGTCTTTTTGGGTTCTAAGAAACGATTTAAGGAGAGAGAGGAAATTGCCGGGATTTTTCGACAAGGAGGTATACGATATTCTTGATTCAGGGTCGCAGAACCCGGCGTTAGCTGTAGCTCTGGCATCGGCTCCGACAACAGCAACGGAGACAGTGGAGAAGGGGGAGGACAGAGGAGGATTGAAGGCGGATGAAGCCGAGGCGGATACAGAGCAACACCTTTACGATAGTAATCGGAGCGCCGCCGTGGAGGATGGCCTGTCCTCAGATTTTGAAGAAGAGGTATATGCAAGTTCGGAGAGGGAGGCGGCGGCGAGGACGGATGTTTTAGCGCCCACAACGGCTATTCCTATCTCAGAGAAGCAATATCAAACACCTCTCAGTGGCCGTCAAGGCGAAGGTAATGCTCAAGGTAACGTGGGAATTCCGACATTTTCTTATTCTATAGGTGCAACCGGCGAGAAACGGCCAGCCTCAAATCCGGAAATGGGTTCTACATCTCGAGGAGGACGAAAGAGGAAACATTTGGCGACAGATGAAGAGGAGGAAAATTTGCAATATCAGTTAATTGATGTCCTGGAAAGAAATGGTAAGATGCTAAACACCCAGCTTGAAACACAGAATATAAATCTCCGGTTGGATCGCGAGCAGAGGAAAGACCACACAAGTAACTTACTTGCTGTCCTTGATAAGCTTGCGGATGCTCTTGGGAGAATTGCTGATAAATTGTAG 1125 0.5004 MAFELQVSLGPNQNPVDGETDGTTNGVDHRPSSTDGGDDGSKAPRLPRWTRQEILVLIQGKRDAENRFRRGRTAGLPFGSGQIEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESHIREESESFWVLRNDLRRERKLPGFFDKEVYDILDSGSQNPALAVALASAPTTATETVEKGEDRGGLKADEAEADTEQHLYDSNRSAAVEDGLSSDFEEEVYASSEREAAARTDVLAPTTAIPISEKQYQTPLSGRQGEGNAQGNVGIPTFSYSIGATGEKRPASNPEMGSTSRGGRKRKHLATDEEEENLQYQLIDVLERNGKMLNTQLETQNINLRLDREQRKDHTSNLLAVLDKLADALGRIADKL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1326 374 MobiDBLite consensus disorder prediction 182 202 - -
Dere14g1326 374 MobiDBLite consensus disorder prediction 1 47 - -
Dere14g1326 374 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 374 - -
Dere14g1326 374 CDD GT1 47 121 - -
Dere14g1326 374 Pfam Myb/SANT-like DNA-binding domain 48 135 IPR044822 -
Dere14g1326 374 MobiDBLite consensus disorder prediction 282 311 - -
Dere14g1326 374 Gene3D - 49 119 - -
Dere14g1326 374 MobiDBLite consensus disorder prediction 7 31 - -
Dere14g1326 374 MobiDBLite consensus disorder prediction 178 202 - -
Dere14g1326 374 MobiDBLite consensus disorder prediction 32 46 - -
Dere14g1326 374 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1326 Dere-ChrDere14 13316920 13318753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1326 48 122 Trihelix Transcription Factor Family AT1G33240 33.333 4.43e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere14g1326 Myb_DNA-bind_4 2e-12 CL0123