Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1318 ATGGGACGAAGACGCTGTATGCTGTCAAATGTCGGGTCGTTGCCGAGTCCACGAAGCGGCACTCTGGTCAGAGGTTTGAACCCTACAAATAGTACTACTTCAATCAAGCTCGCGGGATTTTCTTCGCGGTCGAATTTGTGCTCCTCGTTGAGCACATTTTCCGGGTCGTTGCGTTCGGAGCCTTCCATTTCTTTCTGGAATGCTTCTTCCCAAGAAAGAATGCGTTTTACCAGCTTAGTCCGGGCCAGTTCTGTGGAGGCACCTTTACAATCAAAAGTTACTCAAAAGGTGTATTTTGACATAAGCATTGGAAATCCGGTGGGGAAGCTTGCTGGAAGGATTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGCAGAGAACTTCCGCGCCCTTTGTACAGGAGAGAAGGGCTTTGGGTATAAAGGTTCTACATTCCATCGTGTAATAAAGGATTTCATGATTCAAGGAGGGGACTTTGACAAAGGGAATGGAACTGGAGGCAAAAGTATCTATGGTCGTACTTTCAAAGATGAGAATTTCAAGTTGTCTCATGCGGGACCTGGAGTTGTTAGCATGGCAAATGCAGGCCCCAACACCAATGGTAGTCAGTTTTTTATATGCACTGTCAAGACACCTTGGCTGGACCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGCATGGACATAGTTAGGTTAATTGAGTCACAGGACACAGATCGAGGTGACCGTCCAAGGAAGAAAGTGGTTATCAGTGACTCGGGTGAGCTCCCAATTGCTTAA 789 0.4677 MGRRRCMLSNVGSLPSPRSGTLVRGLNPTNSTTSIKLAGFSSRSNLCSSLSTFSGSLRSEPSISFWNASSQERMRFTSLVRASSVEAPLQSKVTQKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHAGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQDTDRGDRPRKKVVISDSGELPIA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1318 262 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 108 258 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 FunFam Peptidyl-prolyl cis-trans isomerase 83 262 - -
Dere14g1318 262 MobiDBLite consensus disorder prediction 238 253 - -
Dere14g1318 262 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Dere14g1318 262 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 96 259 - -
Dere14g1318 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 MobiDBLite consensus disorder prediction 238 262 - -
Dere14g1318 262 Gene3D - 82 261 IPR029000 -
Dere14g1318 262 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 109 255 IPR002130 GO:0000413|GO:0003755
Dere14g1318 262 CDD cyclophilin_ABH_like 96 257 - -
Dere14g1318 262 SUPERFAMILY Cyclophilin-like 88 259 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1318 Dere-ChrDere14 13261709 13266971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1318 112 256 U-box Gene Family AT5G67530 47.945 3.77e-35 130