Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1315 ATGCGGTGGCTGCAAATGAAGAAACTTCCCCTTCGTACTTGTGAGAGCGGCCACATTCCAAGGCGTACAAAACGCAAGTCGTTTGAGTTTCCCGCACCAAAACTCAAATCGTATGGATGGACACGGCGGTACACGCCACGCAACCCCGAGGAAACCAACACGTCCCTTCTATCTTTCTTATACGCAACACCCGCGAAAGTCCTCCCTAGCTCCGTCCTTCCGTATTATTTCCCTCTCGTCGTCTTCGTTGGCTCGCACCTCTGGAAACCAATGGATTATTGTTTGATGTCATACCTGAATCGTTTCAGAAGTTTGGCCAATTCATTTCTATCGCAATACGAACCTATTGTACTGCTTATCTCTCCTCTGCTTGCTCTCCTTGTCGCCCACACAATTCGGTCGTTTTTTCAGCTCGTTCATGATAAAGGACTTAAACCCACACTACTGGGGTTTCTCATAAACTCTATCAAATTGATCCCTGGTGTGAAGAGTTACATCAATGCCGAGAAGCAGAAGGTTGTGGATAAGTTGCAGTCTGACAGTAAATCTAAAAAAGAAAGTTGGAGAACAGAGTTGCCAAGGGCAGGACTAGGGATGGAAGTTCTTGAGAAAATGGGTGATGAGAAAAGAAATGATGTGATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATTTGATTCGCACTTTTCTTTGATTAATGAGGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTTCACAGTGTTGTACGCTTTGAGGCTGAAGTAGTTGCAATGACAGCTGCACTTCTCGGAAGTAAAGAAAAGAGTTCTGGGGGACAAATATGTGGAAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCTCGTGACTATATGAAGTCTAAGAAAGGAATTACAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCGTATGACAAGGCTGCACAGTATTTTAATATTAAACTCTGGCGCGTCCCAGTTAACAAAAGATTTCAAGCAGATTTGAGAGCAATTCGACGACATATTAACAAAAATACCATCTTGATTGTTGGTTCTGCCCCTGGGTTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTGATCTGGCATCAAGCTTTGGAATTTGTTTTCATGTTGACCTCTGTCTTGGTGGCTTTGTATTACCTTTCGCTCGCAAGCTTGGGTACCCCATTCCACCTTTCGACTTTTCTGTCAAAGGAGTTTCTTCAATATCAGTGGATGTGCATAAATATGGCTTAGCTCCTAAAGGAACAATTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATGGCTGGAAGCCGGCCTGGAGGTCTTATTGCTGGGGCTTGGGCAGCAATGATGTCTTTAGGGGAAGAAGGATACCTGGAGAATACACAAGCAATTATGGATGTTTCAAAAAAATTACAGGAAGGCATACGAGAGATTCCTGAATTGTTCATTATTGGAAGACCGGACATGACAATAGTGGCATTTGGATCTGATGTGTTGGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATTTGAATGCATTGCAGAGACCTAATAGCATCCACATCTGTGTGACACTGCAACATGGGGCAGTTGTTGAAGATTTCCTCAGGGATTTAAAAGAATCTGTGAAAACTGTTAAAGAAAATCCTGGTCCAATAAGTGGAGGGTTAGCACCCATATATGGTGCTGCAGGGAAGATGCCCGATAGAGGTATGGTCCAGGAATTGTTGGTAGATTTCATGGACGGTACCTGCTAA 1842 0.4338 MRWLQMKKLPLRTCESGHIPRRTKRKSFEFPAPKLKSYGWTRRYTPRNPEETNTSLLSFLYATPAKVLPSSVLPYYFPLVVFVGSHLWKPMDYCLMSYLNRFRSLANSFLSQYEPIVLLISPLLALLVAHTIRSFFQLVHDKGLKPTLLGFLINSIKLIPGVKSYINAEKQKVVDKLQSDSKSKKESWRTELPRAGLGMEVLEKMGDEKRNDVIWQGKCSGTVYIGGSEFDSHFSLINEACSMFAHTNPLHLDVFHSVVRFEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRVPVNKRFQADLRAIRRHINKNTILIVGSAPGFPHGIIDPIEELGDLASSFGICFHVDLCLGGFVLPFARKLGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTITEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYLENTQAIMDVSKKLQEGIREIPELFIIGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHGAVVEDFLRDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1315 613 FunFam Sphingosine-1-phosphate lyase 1 464 576 - -
Dere14g1315 613 Pfam Pyridoxal-dependent decarboxylase conserved domain 233 441 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dere14g1315 613 Gene3D - 191 610 - -
Dere14g1315 613 FunFam Sphingosine-1-phosphate lyase 1 573 612 - -
Dere14g1315 613 PANTHER - 126 613 - -
Dere14g1315 613 SUPERFAMILY PLP-dependent transferases 166 576 IPR015424 -
Dere14g1315 613 FunFam sphingosine-1-phosphate lyase 1 230 445 - -
Dere14g1315 613 Gene3D Aspartate Aminotransferase, domain 1 199 576 IPR015422 GO:0003824
Dere14g1315 613 Gene3D - 227 477 IPR015421 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1315 246 573 Calmodulin-binding Proteins AT3G17760 25.137 3.99e-19 89.0