Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1286 ATGGAAAAGGCGAGTGGGGAGGGAAGCGAATCATCGAAATACAAAGGGGTTCGAAAGAGAAAGTGGGGGAAATGGGTATCGGAAATCAGGCTTCCCAACAGTAGGGAGAGGATTTGGTTGGGATCCTATGACACCGCTGAGAAGGCGGCGCGTGCTTTCGACGCCGCCATGTTTTGCCTGCGCGGCCGCAACGCCAAGTTTAATTTCCCCGATAACCCACCCGACATCGCCGGCGGCGGGTCTCTCTCGCCCTCGCAGATTCAGGTCGCCGCTGCCCGTTTTGCGAACTCGGATCCGGAGCCCCATACAGGCCCCACCGTCTCCTCCTCGACGGCCTTGCCTATAGAATCTCCATCTCCGTCTGAGGGGACCGTCCAAACGGATAGTGACTTCACTCTTCACGACCCGTTTCCGGCAATGGGTTCGGGTAATTATGCATCGGATTACGGGATATTTCCGGGTTTTGATGATTTGAGCAGTGGTTTCTACGCGCCGGAAATGCCGAGGGATAATTATGGTGAAGAGAATATGGATGAGGTGATACTTCAGGACTCATTCTTGTGGAATTTCTAG 573 0.5428 MEKASGEGSESSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTAEKAARAFDAAMFCLRGRNAKFNFPDNPPDIAGGGSLSPSQIQVAAARFANSDPEPHTGPTVSSSTALPIESPSPSEGTVQTDSDFTLHDPFPAMGSGNYASDYGIFPGFDDLSSGFYAPEMPRDNYGEENMDEVILQDSFLWNF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1286 190 MobiDBLite consensus disorder prediction 91 133 - -
Dere14g1286 190 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Dere14g1286 190 MobiDBLite consensus disorder prediction 1 20 - -
Dere14g1286 190 SUPERFAMILY DNA-binding domain 12 72 IPR016177 GO:0003677
Dere14g1286 190 FunFam Ethylene-responsive transcription factor 2 12 71 - -
Dere14g1286 190 MobiDBLite consensus disorder prediction 101 131 - -
Dere14g1286 190 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Dere14g1286 190 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Dere14g1286 190 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Dere14g1286 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 123 - -
Dere14g1286 190 Gene3D AP2/ERF domain 12 71 IPR036955 GO:0003700|GO:0006355
Dere14g1286 190 Pfam AP2 domain 12 62 IPR001471 GO:0003700|GO:0006355
Dere14g1286 190 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1286 Dere-ChrDere14 12918787 12919359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1286 7 190 AP2-EREBP Transcription Factor Family AT1G19210 57.812 1.39e-62 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere14g1286 AP2 1.4e-13 CL0081