Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1285 ATGGGAATTGAAAAGTGCAACGAAACGTACACAGTGCGTGAGGCATATCCATGTGGGCCACATGTAGCTTACATACGAGGTCCGAAGGGTGGTGGATCTAGGGAGGGTTTTATCTTCGTTGTATCAACACTCAGCACTTGTTCCGACCACCATTTTCGACACTTGTTCCGACCACCATTTTCGATTAAGCTAGCAGTTGACTCTCCAATGGCGGCAGCTCAGCTGACAGCATCATCAATTTCTACTAGGAACTTGCCATCATTTGAATGGCTTCGACCTTCGGCGGTTCAGTTTTCTTCTTTCGGGAACGTAAGAATTGGCGGCCTCACCCAAAGGTCTTTCAGGGGTCTGGTTGTTAAAGCCGCCACTGTTGTAGCCCCCAAGTACACCTCCATCAAGCCATTGGGTGACAGAGTACTGGTAAAAATTAAGGATGCAGAAGAGAAGACTGAGGGTGGGATCCTACTTCCCACGACTGCTCAAACAAAGCCTCAAGGGGGTGAGGTTGTTGCTTCTGGAGAAGGAAAGACAGTTGGGAAGAGCAAAGTGGACATCAGTATAAAGACAGGCGCACAAGTTGTGTATTCAAAGTATGCAGGGACTGAGGTAGAGTTCAATGGGTTAAAGCATCTTATACTGAAGGATGATGATATTGTTGGTATCCTTGAGACAGATGATATCAAGGATCTCAAACCCTTAAATGATAGAGTCTTAATTAAGGTTGCAGAGGCTGAGGAAAAAACAGCTGGGGGTTTGTTGCTTACGGAGGCAACGAAAGAGAAACCATCCACTGGAACGGTGATAGCAGTTGGACCAGGGCCTCTGGACGGGGACGGCAATAGAAAACCATTATCCATAACTCCTGGTAGCACAGTTATGTACTCCAAATATGCGGGGAATGACTTCAAGGGAAAAGATGGTTCCGATTACATTGCCTTGAGGGCCTCAGATGTCATGGCTGTCCTCTCTTAG 972 0.4702 MGIEKCNETYTVREAYPCGPHVAYIRGPKGGGSREGFIFVVSTLSTCSDHHFRHLFRPPFSIKLAVDSPMAAAQLTASSISTRNLPSFEWLRPSAVQFSSFGNVRIGGLTQRSFRGLVVKAATVVAPKYTSIKPLGDRVLVKIKDAEEKTEGGILLPTTAQTKPQGGEVVASGEGKTVGKSKVDISIKTGAQVVYSKYAGTEVEFNGLKHLILKDDDIVGILETDDIKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSTGTVIAVGPGPLDGDGNRKPLSITPGSTVMYSKYAGNDFKGKDGSDYIALRASDVMAVLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1285 323 PANTHER 10 KDA HEAT SHOCK PROTEIN 129 221 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 FunFam 10 kDa chaperonin 228 323 - -
Dere14g1285 323 Hamap Co-chaperonin GroES [groES]. 131 223 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 SUPERFAMILY GroES-like 130 223 IPR011032 -
Dere14g1285 323 Pfam Chaperonin 10 Kd subunit 132 221 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 Pfam Chaperonin 10 Kd subunit 230 321 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 CDD cpn10 131 222 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 CDD cpn10 230 322 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 FunFam 20 kDa chaperonin, chloroplastic 125 224 - -
Dere14g1285 323 ProSitePatterns Chaperonins cpn10 signature. 132 156 IPR018369 GO:0005524|GO:0006457
Dere14g1285 323 SUPERFAMILY GroES-like 229 322 IPR011032 -
Dere14g1285 323 Gene3D GroES chaperonin 124 224 IPR037124 GO:0006457
Dere14g1285 323 Gene3D GroES chaperonin 225 323 IPR037124 GO:0006457
Dere14g1285 323 SMART Cpn10_2 131 222 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 SMART Cpn10_2 229 322 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 Hamap Co-chaperonin GroES [groES]. 229 323 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 ProSitePatterns Chaperonins cpn10 signature. 230 254 IPR018369 GO:0005524|GO:0006457
Dere14g1285 323 PRINTS 10kDa chaperonin signature 188 200 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 PRINTS 10kDa chaperonin signature 154 175 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 PRINTS 10kDa chaperonin signature 132 147 IPR020818 GO:0005524|GO:0006457|GO:0044183
Dere14g1285 323 PRINTS 10kDa chaperonin signature 209 222 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1285 Dere-ChrDere14 12912954 12918587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1285 70 323 Calmodulin-binding Proteins AT5G20720 76.562 9.27e-136 384