Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1284 ATGAAGGCTCCGTCCAACGGTTACTTGCCCAATTCTGGCGAAGGGGAAAAGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCGTTGGTTTCTTTGCCTCCGGTTGGTAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAACAAGTTGCTGCATCTATGCAAAAGGAGGCTGATTTTGTACCCGGTTACCCTAACCTTCCATCAAAGATGATTTGCATGCTTCACAATGTTGCCCTGCATGCTGATATTGAAACTGATGAGGTTTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGACATGGGTCTCAAGCAAAGCCGACAACCTACTGAATTCTTCTGCAAAACTCTAACAGCTAGTGATACAAGTACTCATGGTGGATTTTCTGTACCACGTAGAGCAGCTGAGAAAATATTCCCAGCTCTGGATTATTCAATGCAACCTCCAGCTCAGGAGCTTGTTGCCAAAGATTTGCATGACACTACATGGACATTCAGACATATTTATCGTGGACAACCCAAGAGGCATCTCCTGACCACTGGTTGGAGTGTCTTCGTAAGCACAAAAAGATTGTTTGCTGGAGATTCTGTTCTATTTATCAGGGATGAAAAACGGCAACTTCTTTTAGGTATAAGGCATGCTAATAGACAGCTGTCAGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCAGCAGCTCATGCTGCTGCAAATAACAGCCCATTTACAGTATTTTACAATCCGAGGGCTAGCCCCTCTGAATTTGTTATTCCGTTGGCAAAGTATAACAAAGCAATGTATACTCAAGTTTCACTTGGCATGAGATTTAGAATGATGTTTGAGACAGAGGAGTCAGGAGTGCGAAGATACATGGGTACAATCACTGGGATCAATGACTTGGATCCTGTGCGATGGAAGAACTCACAGTGGCGTAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGCCCAAGTAGAGTCTCAATTTGGGAAATTGAACCAGTGGTGACTCCTTTCTACATTTGCCCACCGCCTTTTTTCAGGCCCAAGTTCCCCAAGCAACCGGGGATGCCAGATGATGAGTCTAATATAGAAAATGCTTTCAAGAGAGCTATGCCCTGGCTTGGAGATGACTTTGGTGTGAAGGATGCCTCGAGTTCTATCTTTCCTGGTTTAAGTCTAGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTTTCTGCTGCTCAGTCAGGGATTTTCCCTACCATGCTTTCACCTAATTCCCTTCATAGCAACCTTTGCACTGATGATCCATCCAAGTTATTGAGTTTTCAAGCCCCTGTAACTTCTTCACAAAGTATTCAATTTATCAAACCAAATTTATCAAATCAAGTGAACCAATTGCAACAGCCCCCCACACCATGGCCTCAGCAGCAGCAGCTGCCATCAGCGTTGCAAACGCCAGTAAACCAGCTCCAGCAGCAGAGGGAGCAGCAGCCTGAGTCACAAAATCTGGTGCAGCTGCAACACCAACAGCAACACACCATTATGAATAATGGGGTAGTTGCCTCTACTCAGATTCCTAGTCAGAGTGTACAACAACCAGTAACCTACTCGCAGCTTCAGCAGCAGCAACTAATCTCAAGCAATATCCCAACCCAGCAAAGTATTCAACCAACTAATAAGAATACATTCCCTTTGACGTCCTTACCACAAGATTCACTATTCCAGCAACAGATAGACCAGCAAGCTTGTCTCTTACAGAGACAACAGCAGCAGCAGACACAGTTACAACAATCCCCATTGCAGTTATTGCAACAGAGTCTGTCACAAGGGGCACCACAGCAACAAGTGACTCAACTTTCTCAGCAAAATCTCTCAGAGCAACAACTGCAGTTACGGTTGCTACAGAAATTGCAGCAGCAACAACAGCATCAGCAAGTTCTTCCCCCATCATCCAGCCCACTGTTGCACCCTCAGCTGCTACAGCAACAAAATGCTAACCAACAAAACCAGCAACTACCGCAGCTGCCTCCATCTCAGCCTCAACAGCTTAGCAACAATGCCACCTCAACAGAGAGGCTTCTGAACAGTAGCAGCTTTTCTTCTTCAGCTCTGATGCAATCACAACAGCTTCCTGTGAACCAATCTCAGAACACTCAGAAACCACTCACAACTACCCGAATGCCTTCTAATCTTAATGATGCTGATGCCCCTTCATGCTCAACCTCACCATCAACTAATAACGTCCAGATTTCTCCACCAAATCTACTGAAAAGAAATCATGTATCAGCGACATTAGGGGGAAGCTTGCTAGTTGAGCCCACTAGTAATCTGATGCAGGAGCTTCAGGGCAAGTCTGACATCCAGATCAAACATGAGATTCCCAATGTAAAAGGACCTGACCAGCTAAGGTATAAAGGGACATGTACTGATCAGCTGGAAGCTACCTCTTCTGGAACGCCTTACTGTCTTGATCCTGGTAACGTCCAGCAGAGCTTTCCACTTCCCAGCTTCTGCATGGAGGGGGATATGCAACCTCAACCTAGAAACAATCTACCATTTGCCCCTAATCTAGATGGACTAACACCCGATACTCTACTCTCAAGGGGGTATGACTCTCAAAAGGATCTTCAAAATTTGCTCTCTAATTACGGCAGTGCTCCGAGAGACATTGAAACTGAGCTGTCCACTGCTGACATCAGCTCTCAGTCATTTACAGTGCCAGATATGCCTTTTAAGCCTGGTTGCTCAAGCGATGTTGCCATCAATGATACTGGGGTTTTGAATAACGGCTTGTGGACTAACCAGACTCAACGAATGAGAACATATACTAAGGTCATACTAAGTGTTACTGTTAGTGGCTGCCTTCCTGGTCGTTTAACGACGCTTCTAACTCAATCCATACCTGAGTACGTTCAAAAGCGTGGCTCAGTGGGACGATGTATTGACGTCAACCGTTACAAGGGATATGATGAGCTCAGGTATGATTTGGCTCGCATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACCGACTGGAAATTAGTATATGTGGATCATGAAAACGACATTCTTCTTGTTGGTGATGACCCTTGGGAGTACGTAGTGAATTCCTTGTGGCTAATTTTTCATCCATTCTGGTTCAATTTTTTAACTTTTCAACTCATACTACATTGCAGAGAATTTGTAAGCTGTGTCCAGAGCATCAAAATACTGTCATCCGCCGAGGTGCAGCAAATGAGCTTGGATGGAGACTTGGGTAATGTTCCACCTCCCAATCAAGCTTGTAGTGGGACTGACAGTGGCAATGCATGGAGGGGACAGTATGATGATAATTCAGCTGCTTCATTCAATCGATAA 3417 0.4504 MKAPSNGYLPNSGEGEKKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPGYPNLPSKMICMLHNVALHADIETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDYSMQPPAQELVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKRQLLLGIRHANRQLSALSSSVISSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVTPFYICPPPFFRPKFPKQPGMPDDESNIENAFKRAMPWLGDDFGVKDASSSIFPGLSLVQWMSMQQNNQFSAAQSGIFPTMLSPNSLHSNLCTDDPSKLLSFQAPVTSSQSIQFIKPNLSNQVNQLQQPPTPWPQQQQLPSALQTPVNQLQQQREQQPESQNLVQLQHQQQHTIMNNGVVASTQIPSQSVQQPVTYSQLQQQQLISSNIPTQQSIQPTNKNTFPLTSLPQDSLFQQQIDQQACLLQRQQQQQTQLQQSPLQLLQQSLSQGAPQQQVTQLSQQNLSEQQLQLRLLQKLQQQQQHQQVLPPSSSPLLHPQLLQQQNANQQNQQLPQLPPSQPQQLSNNATSTERLLNSSSFSSSALMQSQQLPVNQSQNTQKPLTTTRMPSNLNDADAPSCSTSPSTNNVQISPPNLLKRNHVSATLGGSLLVEPTSNLMQELQGKSDIQIKHEIPNVKGPDQLRYKGTCTDQLEATSSGTPYCLDPGNVQQSFPLPSFCMEGDMQPQPRNNLPFAPNLDGLTPDTLLSRGYDSQKDLQNLLSNYGSAPRDIETELSTADISSQSFTVPDMPFKPGCSSDVAINDTGVLNNGLWTNQTQRMRTYTKVILSVTVSGCLPGRLTTLLTQSIPEYVQKRGSVGRCIDVNRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEYVVNSLWLIFHPFWFNFLTFQLILHCREFVSCVQSIKILSSAEVQQMSLDGDLGNVPPPNQACSGTDSGNAWRGQYDDNSAASFNR 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1284 1138 FunFam Auxin response factor 289 361 - -
Dere14g1284 1138 ProSiteProfiles PB1 domain profile. 984 1081 IPR000270 GO:0005515
Dere14g1284 1138 MobiDBLite consensus disorder prediction 1107 1138 - -
Dere14g1284 1138 SMART B3_2 126 228 IPR003340 GO:0003677
Dere14g1284 1138 FunFam Auxin response factor 124 228 - -
Dere14g1284 1138 Gene3D - 988 1102 - -
Dere14g1284 1138 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Dere14g1284 1138 Gene3D - 289 360 - -
Dere14g1284 1138 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 1100 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dere14g1284 1138 SUPERFAMILY CAD & PB1 domains 999 1058 - -
Dere14g1284 1138 MobiDBLite consensus disorder prediction 481 519 - -
Dere14g1284 1138 CDD B3_DNA 125 217 IPR003340 GO:0003677
Dere14g1284 1138 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Dere14g1284 1138 Gene3D - 123 227 IPR015300 -
Dere14g1284 1138 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dere14g1284 1138 MobiDBLite consensus disorder prediction 682 771 - -
Dere14g1284 1138 MobiDBLite consensus disorder prediction 1111 1138 - -
Dere14g1284 1138 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1284 Dere-ChrDere14 12904881 12912103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1284 1 1138 B3 DNA Binding Superfamily AT1G19220 61.059 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Dere14g1284 B3 1.9e-19 CL0405