Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1275 ATGGGAAGAGAAAGAGACGATCCGAAGCAGCGACAGCAGCAGCAGGTAGCTTGCACAGTGGAGCAGCTTGTTGCTGTTAATCGCTATAATCCTGATATCCTTCCCGATCTTGAAAACTATGTCAACGAGCAGGTTTCGTCACAAACATACAGTCTGGAGGCAAATCTCTGCCTTCTTTGCCTTTACCAGTTCGAACCAGATAGAATGAGTTCCCAGATTGTAGCCCGCATATTAGTTAAGGCCCTCATGGCAATGCCAGCTCCAGACTTCAGCCTGTGTCTCTTTTTGATTCCAGAACGTGTGCAAATGGAGGAACAGTTCAAGACACTGATTATTCTATCACATTATTTGGAGACAGGAAGATTTCGCCAGTTCTGGGAAGAAGCAGCCAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAGGAAATCCAAGGCTATGCGATTCATGTCCTTTCCTTAACTTACCAAAAGGTTCCTAGATCTGTACTTGCTGAGGCCATCAACATAGAAGGTTTATCCTTGGACAAAGTCCTTGAACACCAAGTAGCCAACTGTGGTTGGGTTATTGAGAAAGGCCATGGCAGGGGCCAACTCATTGCCCTACCGAGAAATGAATTCAATGACCCGGTTTTGAAGAAAAATACTGCAGATAATGTACCATTGGAGCACATCACTCGCATCTTTCCAATTCTAGGCTGA 708 0.4534 MGRERDDPKQRQQQQVACTVEQLVAVNRYNPDILPDLENYVNEQVSSQTYSLEANLCLLCLYQFEPDRMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIILSHYLETGRFRQFWEEAAKSRHIVEAVPGFEQEIQGYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKVLEHQVANCGWVIEKGHGRGQLIALPRNEFNDPVLKKNTADNVPLEHITRIFPILG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1275 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 10 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dere14g1275 235 ProSiteProfiles PCI domain profile. 50 209 IPR000717 -
Dere14g1275 235 SUPERFAMILY "Winged helix" DNA-binding domain 140 232 IPR036390 -
Dere14g1275 235 FunFam Eukaryotic translation initiation factor 3 subunit K 12 128 - -
Dere14g1275 235 Pfam CSN8/PSMD8/EIF3K family 70 195 IPR033464 -
Dere14g1275 235 Gene3D - 131 233 IPR036388 -
Dere14g1275 235 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 11 235 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dere14g1275 235 SUPERFAMILY ARM repeat 13 137 IPR016024 -
Dere14g1275 235 Gene3D ARM repeat; domain 1 10 128 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Dere14g1275 235 FunFam Eukaryotic translation initiation factor 3 subunit K 131 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1275 Dere-ChrDere14 12749330 12752448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1275 1 235 Eukaryotic Initiation Factors Gene Family AT4G33250 74.043 7.40e-126 354