Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1256 ATGGAAGCAAAAGTTGCAGTAAAAGAATTGGTAGAAGTAGAGGAAAACCCGCCACACACATGTGATAATAACAATAATATTACAGATGCATCACAGAAGAATAATACTTTGGGGTTGCTGCGAATCAAGCTGGAGGAAGTGAAGAAAGAGAATCGGAATTTGAAAGCTATGATAAGTCAGATCACTGAACACTACACTGCTCTTCAGAACCGCCTTCTTTTGACAAAACGGCAGCGACAATTGCGACTAAATTTTCATAATTTGCAGAAAGACAACAAACGAGATGACGTGGAGAAAGCAGTGTTGCCCACCCGGCAATTCTTGGATATCAGTGACCCTTCATATGAACCTCATAGCAATAACCAATTAACATCGGAAGGTGCAAAATACAAAGAGGATGATCATGCTTCTCATCAGGCATATTCTTGCAGGAAAGCTAGAGTGTCCATAAGGACACGTTCGGATCTTTCTTTGATAGGTGATGGCTGTCAATGGAGAAAGTATGGACAAAAGATAGCAAAGGGAAACCCATGTCCTAGGGCTTACTATCGTTGCAACATGGGAACTTCGTGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCTAAGGATGAGAGTGTTGTGATCACAACCTACGAAGGGAAGCATAATCATGCTCTTCCACCAGAAGCCACACCTATGGCTACCACAACATCAGCAGCATTGAATATGTTCCTTTCTGGCTCAACCACTAGTAGTGCACATGGCAACTCCACGCTGCCAAACTCAGGCCTCTTGTCTTCAATACTATCTACTTCTTCCTCAACTGCACTGGCTTCCTTGTCTGCATCTTCATCTTGTCCTACAGTAACACTGGACTTAACCCAAAGGCCTGCCTCATCAAGCCAATCACAATTCCCATTTCCTTTTGCATTGGATGGCTATAATACCACTCAACAATCTAAGGGGTCTTCCAAGCTTCCAACAATGGTGGCCCCACAGAAAAATGTGTCCCTGGTGGATGTGATCAGTGCAGCTATAGCTAAAGATCCTTCATTCGAGGCAGCATTAGTTGCAGCCGTTTCATCATTTGCTGGACCCACTTCATCGCAACGTTGA 1095 0.4402 MEAKVAVKELVEVEENPPHTCDNNNNITDASQKNNTLGLLRIKLEEVKKENRNLKAMISQITEHYTALQNRLLLTKRQRQLRLNFHNLQKDNKRDDVEKAVLPTRQFLDISDPSYEPHSNNQLTSEGAKYKEDDHASHQAYSCRKARVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTSCPVRKQVQRCAKDESVVITTYEGKHNHALPPEATPMATTTSAALNMFLSGSTTSSAHGNSTLPNSGLLSSILSTSSSTALASLSASSSCPTVTLDLTQRPASSSQSQFPFPFALDGYNTTQQSKGSSKLPTMVAPQKNVSLVDVISAAIAKDPSFEAALVAAVSSFAGPTSSQR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1256 364 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1256 364 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1256 364 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 358 IPR044810 GO:0003700
Dere14g1256 364 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere14g1256 364 Coils Coil 37 71 - -
Dere14g1256 364 SUPERFAMILY WRKY DNA-binding domain 151 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere14g1256 364 Gene3D WRKY domain 143 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1256 Dere-ChrDere14 12563471 12567041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1256 125 356 WRKY Transcription Factor Family AT4G04450 48.617 1.14e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere14g1256 WRKY 1.1e-22 CL0274