Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1251 ATGCGGAAAGGTAATGCAATGGTGATCGTAAGACTGGGGAAGAAGAAGGAGAAGGAGAGGCAAGAAGGAATGAGGCTTGGGAAGTACGAGGTAGGGAGGACTCTAGGCGAAGGTAGTTTTGGAAAAGTCAGGTTGGCCAGGAACGTCTTTTCTGATCAGCCTTTCGCCCTTAAGATCATCGACAAGACCAACATCATCCACCTCAATTTCACTCACCAGATAAAGAGGGAGATAGCGACCTTGAAGCTCCTGAAGCATCCCAACGTCGTCAGATTACACGAGGTTTTGGCTAGCAAAACCAAAATTTACATGGTCTTAGAGTACGTCAATGGAGGAGAATTGTTTGACAGAATTGCATTCAAAGGTAAATTTAAAGAAGCTGAAGGTAGGAGGCTTTTCCAACAGTTAATTGATGGTGTGGCCTACTGTCACAGTAAAGGTGTCTGCCACAGGGATCTCAAGCTGGAGAATGTACTCGTGGATGTCAAAGGGAACATAAAGATAACCGATTTTGGCCTCAGTGCCATGCCCCAGCACATTAGGGCAGATGGATTGCTTCATACAACATGTGGAACTCCCAATTATGTTGCACCAGAGGTACTTGCTAATAGAGGTTATGACGGTGCAACATCAGATACATGGTCATGTGGTGTTATCTTGTTTGTAATTCTAACGGGATACCTTCCTTTTGATGATCGAAATCTTGTAGTTCTCTATCAAAAGATATTTAAAGGAGATGTTCAGATACCAAAGATGCTATCACCTGGTGCCCAAATCATGTTAAGGAGGATTCTTGATCCCAACCCTCTTACCCGGATAACACTGGCTGGTATCAAAGAAGATGAATGGTTCAGGCAGGACTATGTTCCAGCAAATCCTGAGGATGAAGAAGAGGTAGAGGCAGAGGATGTATATATTGACGATGAAGCCTTTTCAATCCATGAACTACATGAAGCAGAACAAAAGAGTCCTGAATCACCGACCCCTATCAATGCATTTCAGTTGATAGCGATGTCTTCATTCTTAGACCTCTCTGGCTTCTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCCAACCATTCAGGAAAATATCTGATTGAAAAGATTGAAGCTATCGGAACAGAAATGGGATTTAGAGTCCAAAAGAAAAATGGAAAATTGAAAGTGATACAAGAGCACAAGGCGCGCAAAAGTCTAGGTTGCCTCTCAGTGGCAGCAGAGGTCTTTGAAATAAGCTCATCCTTGCATGTAGTTGAATTAAGGAAATCATATGGAGACTCTTCTGAATACAGACAGTTGTGCAAGAAATTATCAAATGATTTAGCAGATCCCCCAAATTAA 1353 0.4235 MRKGNAMVIVRLGKKKEKERQEGMRLGKYEVGRTLGEGSFGKVRLARNVFSDQPFALKIIDKTNIIHLNFTHQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLEYVNGGELFDRIAFKGKFKEAEGRRLFQQLIDGVAYCHSKGVCHRDLKLENVLVDVKGNIKITDFGLSAMPQHIRADGLLHTTCGTPNYVAPEVLANRGYDGATSDTWSCGVILFVILTGYLPFDDRNLVVLYQKIFKGDVQIPKMLSPGAQIMLRRILDPNPLTRITLAGIKEDEWFRQDYVPANPEDEEEVEAEDVYIDDEAFSIHELHEAEQKSPESPTPINAFQLIAMSSFLDLSGFFEKEDVSERKIRFTSNHSGKYLIEKIEAIGTEMGFRVQKKNGKLKVIQEHKARKSLGCLSVAAEVFEISSSLHVVELRKSYGDSSEYRQLCKKLSNDLADPPN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1251 450 CDD CIPK_C 331 442 - -
Dere14g1251 450 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Dere14g1251 450 ProSiteProfiles NAF domain profile. 325 349 IPR018451 GO:0007165
Dere14g1251 450 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Dere14g1251 450 SMART serkin_6 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1251 450 FunFam Non-specific serine/threonine protein kinase 22 327 - -
Dere14g1251 450 SUPERFAMILY Protein kinase-like (PK-like) 26 335 IPR011009 -
Dere14g1251 450 FunFam Non-specific serine/threonine protein kinase 20 108 - -
Dere14g1251 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Dere14g1251 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 436 - -
Dere14g1251 450 Pfam NAF domain 327 386 IPR004041 GO:0007165
Dere14g1251 450 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1251 450 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
Dere14g1251 450 ProSiteProfiles Protein kinase domain profile. 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1251 450 FunFam Non-specific serine/threonine protein kinase 327 448 - -
Dere14g1251 450 Gene3D Kinase associated domain 1, KA1 324 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1251 Dere-ChrDere14 12538960 12543852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1251 92 446 CBL-interacting serine-threonine protein kinases AT3G17510 68.732 9.33e-174 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere14g1251 Pkinase 1.1e-68 CL0016