Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1244 ATGTGCTTCTTGTGTTCTCTAATTCCCTCCAGCGGCACAACAGGGTCGGTGCCTTGCTGCAAACCTCTGTTGTCTAGCGAAGAAGAGGAGGACTGGTCTGCGGAGGGTCATTTTAGATTGGACGCAAGTCGTCGACAGATATTTGGCATCAGCGAAATGGCATCAGGTCTAAATTCAGGACTGTCCAGGAAAACGTTTATTTTTGGTTTGAAAGTGTGGGTATTAATGGGAATAACAGTTGGTTTGTTCATTATAATAATTCTTGTGGTGTTAATATGTCTTACATCACGAAAAAGATCCAGAGGAGTCAATGGCATGCTTCCCCTTAGTCATATGTTATCGATTTCAGAAGAGATCAAAGAGATAAGAGTTGATCAAGTTTCAGCTAATAACCATTTTCAGAATGGTGCTTTTATGAATCTGAATGACAAATTTAGTGACAGGGATTCTGAAAAGGTTTTGATCCAAACAAAAAATGGAGATAATAGTAGTCAATTGGGCTTATTGAATCATATAGAGAAAGATGCTGCTGGTTCTCAATCTGGGGAAGAAAGTGGTGCTATGACCATTTCTGCTTATAGGTCATCTCTGTATCCTATAACTGCACCATCCCCATTGTCTGGTCTGCCTGAATTCTCTCAGCTTGGCTGGGGCCACTGGTTTACATTAAGGGACCTAGAACATGCAACTAACAGGTTTTCAAGGGACAATGTCATTGGTGAAGGTGGATATGGAGTTGTTTATCGTGGTCAGCTAATTAATGGGAACCCTGTGGCTGTCAAGAAGCTACTCAATAACTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTCGAGGCTATTGGTCACGTGCGCCATAAGAACTTGGTTAGACTTCTGGGGTATTGTATTGAAGGAACTCATAGGTTGTTGGTTTATGAATATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGGTATCTGACTTGGGATGCACGGATCAAAATTCTACTTGGCACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAACCTAAAGTTGTGCATCGAGACATTAAGTCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAGATATCTGACTTTGGGCTGGCTAAGTTGCTGGGCGCTGGAAAAAGTCACATTACAACTAGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAACTCTGGCTTGCTCAATGAGAAGAGTGATGTTTATAGCTTTGGGGTATTGCTTCTTGAAGCAATTACTGGGAGAGACCCAGTGGACTATGGTCGACCAGCAGCTGAGGTAAATTTGGTAGATTGGCTCAAGATGATGGTAGGGAGTAGGCGTTCAGAAGAGGTAGTGGACCCCAACATTGAGACTAGGCCATCAACAAGTGCCCTCAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTGGACCCAGATGCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGTATGCTTGAATCGGAGGAATATCCCGTACCTAGAGAGGATCGAAGACACCGAAGAAGTCAGGCAGGAAACCTAGAGGTAGAGGGCCAGAGGGAGACTTCTGATACAGAAAAGAGTGACAATCCAGATTATAGGTCCAATGGCAGAAGGAAGCAACAGAGCTAG 1668 0.4335 MCFLCSLIPSSGTTGSVPCCKPLLSSEEEEDWSAEGHFRLDASRRQIFGISEMASGLNSGLSRKTFIFGLKVWVLMGITVGLFIIIILVVLICLTSRKRSRGVNGMLPLSHMLSISEEIKEIRVDQVSANNHFQNGAFMNLNDKFSDRDSEKVLIQTKNGDNSSQLGLLNHIEKDAAGSQSGEESGAMTISAYRSSLYPITAPSPLSGLPEFSQLGWGHWFTLRDLEHATNRFSRDNVIGEGGYGVVYRGQLINGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSEEVVDPNIETRPSTSALKRALLTALRCVDPDAEKRPKMSQVVRMLESEEYPVPREDRRHRRSQAGNLEVEGQRETSDTEKSDNPDYRSNGRRKQQS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1244 555 PANTHER OS01G0323000 PROTEIN 56 530 - -
Dere14g1244 555 Pfam Protein kinase domain 234 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1244 555 MobiDBLite consensus disorder prediction 494 548 - -
Dere14g1244 555 CDD STKc_IRAK 239 505 - -
Dere14g1244 555 SUPERFAMILY Protein kinase-like (PK-like) 217 512 IPR011009 -
Dere14g1244 555 Gene3D Transferase(Phosphotransferase) domain 1 309 520 - -
Dere14g1244 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Dere14g1244 555 FunFam Putative receptor-like serine/threonine-protein kinase 309 520 - -
Dere14g1244 555 ProSiteProfiles Protein kinase domain profile. 233 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1244 555 Gene3D Phosphorylase Kinase; domain 1 213 308 - -
Dere14g1244 555 ProSitePatterns Protein kinases ATP-binding region signature. 239 262 IPR017441 GO:0005524
Dere14g1244 555 FunFam Putative receptor-like protein kinase 215 308 - -
Dere14g1244 555 SMART serkin_6 233 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1244 555 MobiDBLite consensus disorder prediction 494 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1244 Dere-ChrDere14 12458374 12462418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1244 69 507 Trihelix Transcription Factor Family AT1G70460 39.189 5.24e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere14g1244 Pkinase 2.6e-48 CL0016