Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1242 ATGGGCTGCTTTAGCTTTTGCAAAAGAAGTGATGATTATAAGGCTTCTGATAATGGACCCTTCATGCCAAAGCCAAACCATTCTACTGGGAACACTGCATATCATGAAGGACAAGCATCAACAACCACTCCACGTACTGTAGATGTTCAACCCATTGCTGTTCCTTCCATTTCAGTTGATGAAATGAAATCTCTGACTGATAATTTTGGCACGAAATCTTTCATTGGTGAGGGTGCTTATGGTAAGGTATACCGTGGTGTTTTGAAAAATGGGCGTGATGTGGTAATTAAGAAGTTAGATTCCAGTAGGCAACCAGACCAAGAATTTCTTGCTCAGGTCTCGATTGTGTCAAGGCTAAAGCATGAGAATGTTGTTGAGCTTCTTGGTTATTGCGTTGATGGTCCTTTCCGAGCCCTAGCCTATGAGTATGCTCCTAAAGGATCTCTTCATGATATTCTACATGGACGCAAAGGTATCAAGGGTGCACAACCTGGTCCACTATTGTCATGGACAGAGAGAGTTAAAATTGCAGTTGGTGCAGCTAGAGGACTTGAGTATCTACACGAAAAAGCAGAGACTCGTATTATCCATCGTTATATCAAGTCCAGCAACATACTACTTTTTGAAGATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCTGCTGCACGTCTCCATTCTACTCGTGTTCTTGGAACCTTTGGCTATCATGCACCAGAATATGCCATGACGGGTCAGCTCACTTCAAAAAGTGATGTCTACAGTTTTGGAGTAATACTTCTAGAACTCTTAACTGGACGGAAACCTGTTGATCATACACTGCCACGAGGGCAGCAAAGCCTTGTCACGTGGGCAACGCCAAAATTGAGTGAAGACAAGGTGAAACAGTGTATGGATGTGAAATTAAAGGGAGAGTACCCTCCAAAGGCAGCTGCAAAGATGGCTGCTGTTGCTGCTGTGTGCGTACAATATGAAGCTGAGTTTCGACCAAATATGAGCATAGTAGTGAAAGCTTTACAGCCTCTACTTAATGCTCGCTCTTCTGTTCACCCAAAGCAACCACCCAACTTGTAA 1092 0.4313 MGCFSFCKRSDDYKASDNGPFMPKPNHSTGNTAYHEGQASTTTPRTVDVQPIAVPSISVDEMKSLTDNFGTKSFIGEGAYGKVYRGVLKNGRDVVIKKLDSSRQPDQEFLAQVSIVSRLKHENVVELLGYCVDGPFRALAYEYAPKGSLHDILHGRKGIKGAQPGPLLSWTERVKIAVGAARGLEYLHEKAETRIIHRYIKSSNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCMDVKLKGEYPPKAAAKMAAVAAVCVQYEAEFRPNMSIVVKALQPLLNARSSVHPKQPPNL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1242 363 SUPERFAMILY Protein kinase-like (PK-like) 47 345 IPR011009 -
Dere14g1242 363 Gene3D Transferase(Phosphotransferase) domain 1 145 359 - -
Dere14g1242 363 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Dere14g1242 363 Pfam Protein tyrosine and serine/threonine kinase 73 345 IPR001245 GO:0004672|GO:0006468
Dere14g1242 363 CDD STKc_IRAK 75 348 - -
Dere14g1242 363 FunFam pto-interacting protein 1 145 356 - -
Dere14g1242 363 PIRSF ILK 26 357 - -
Dere14g1242 363 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 7 353 - -
Dere14g1242 363 MobiDBLite consensus disorder prediction 22 44 - -
Dere14g1242 363 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1242 363 MobiDBLite consensus disorder prediction 15 44 - -
Dere14g1242 363 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1242 Dere-ChrDere14 12455023 12457142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1242 44 359 Receptor kinase-like Gene Family AT4G02010 45.858 2.10e-89 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere14g1242 PK_Tyr_Ser-Thr 1.5e-47 CL0016