Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1236 ATGGGTGAGGGCAGGAAATACATTCTTAACAAACAATTAGACCTTGATGAGATATTACGGGAAGCAGAGTACCGTTGGCTTAGACCCCCTGAAATCTGCGAAATACTTCGCAATTATCAAAAGTTTGAGTTAACACCAGATCCACCTATTAGACCTCCAGCTGGATCACTATTCTTGTTTGATCGAAAAGCACTTCGTTACTTTCGCAAAGATGGTCACAGATGGAGGAAGAAAAAAGATGGGAAGACTGTGAGAGAAGCTCATGAAAAGTTGAAGGCTGGCAGTGTGGACGTTCTGCATTGTTACTATGCTCATGGGGAGGATAATGAGAATTTTCAACGGCGAAGTTATTGGATGCTTGATGAGAAGTTAGAGCACATTGTCCTTGTCCATTACCGAGAAGTTAAAGAGGGATACAAGGCTGCTGTTTCACATTTGCCAGTAGATCCAGTACCCTTGGTTGGTAGCCCTCAGAGTGGTTTTGCACGAGTAAATTCGACCCTTTCTTTAGCCCAAACACCTTATGCATCAAGTGCATATAGAGTTTATTTTAATGGAAGAGCACTATCTTCAGAGGATGAGGATGTGGACTCTACCTGTGGTCATCAAGCCTCTTCTTACACTCAATCTGTCAGCAGTTCCCTACCACAAAGTGCACTTTTATTTGCACATGAAGCCACTGGAGTTTCTCAGTTTTCAAGGAGCCCCTGTAATTCATGGTCATCTTCTCTCCCTAGCTTTTGTCCTGGCAATTTCTCATCTCCGTGGCCATTAAATCAGAACTCTAGTAGAAAGGCAGTTAATATACATGATAGAAATCTTAATGTTGAAGGATCCAGTGAATGCTTCAAAGCTGATTTCATTGTTCATAAGCTAGGAGATGCAAGGGTAGATGCAGATAGCACAATGCAAGATGCTGTAACTTGCAGAAATAGGTTGACCACTGACATGTACCTGCAGTCAGTTATAGGAGTGTCAAAGATGGTAAATCAGGAACAAAAGGATCATGATTTAAATTCATATTATATCCAATTGCAGGATCCTACTGATCATCCAGCTGCTGAATCTTCAACTGTCTTAGTAGAACAAAAACTAAAACATGGAAGTAAATATAATGGTGAATCAGACCATTTTAAATCTGGAGAGCTGAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAAATTGGTGGTGACTGTGATGATTCTTTAATGGCTTCAGACTCTGGCAACTATTGGAATACACTTGATGCTCATAATGGGGACAAAGAAGTGTCCAGTTTACATATGCAGTTGGATATAGATTCATTGGGTCCTTCTCTTTCCCAAGAACAACTATTTAGCATCCATGAGTTTTCTCCAGATTGGGCATATGCTGGGGTTAAAACAAAGGTTTTGATAGTTGGCACATTCTTCGGGAGTAAGAAGCTTTCTACTGAGACAAAGTGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGACTGATAATGTCATACGGTGTCAGACTCCTTTGCATTCACCTGGTCGTGTTCCATTCTATGTTACCTGCAGTAATAGGTTAGCCTGCAGTGAGGTGAGAGAATTTGAATATCGTGAAAACCCAACTGTTGGTCCTATGGGTATTAAAATTACACCAAAAGATGAACTATGCCTTCAATTGCGACTACTAAGGTTACTTGACCTGGGGCCTGACAAGAACTGGTTGAACTGCTCTGTTTCTCAGTGTGAGAAATGTAAGTTAAAAGAAAAAATGTACTCAATAAGAGATGAGGGTGGAATATCTCAAGATGCTTTCAAGATAAATGAAAGTGATTATGCAAGCCATAGAGATGTATTAGTGCAAAGGTTCCTGAGAGACAAGCTTTATGAGTGGTTGGTGTTTAAGGTCCATGAAGAAGGAAAAGGACCGCACATGTTGGATAATGAAAGCCAAGGAGTGATACATTTGGCAGCTGCTCTTGGTTATGCATGGGCTATGGGTCCCTTAGCTGTTGCTGGTGTCAGTCCTAACTTTAGAGACGCTCGAGGAAGAACAGGACTTCACTGGGCATCATATTTTGGGAGAGAGGAAACTGTCATTGCATTAATCAAATTAGGTGCAGCCCCGGGTGCTGTTGAGGATCCAACATCAGCTTTTCCTCAAGGACTAACGGCTGCTGATTTAGCTTCAAGTAGAGGACATAAAGGCATTGCAGCATATTTGGCTGAGGCCAATCTGACAAGTCACTTATTGACTGTCAATGTAAATGAGATGGACAACATTGCTGCAGCCAGAGCAGCTGATAGTGCTTTTGAGACTGCTCAAGCTGACTCATCTCATATGACAATGGATGAGCAGCGCTATCTAAAAGAGTCGCTTGTGGTTTTTCGAAAATCAGCTCATGCAGCTGCATTAATTCAAGCTGCCTTTAGAGCAAGATCATTCCGTCAGAGACAATTAACCAATGCTAGTGTCGATATCCCTGAAGCAGTGGTCAATCTAGTAGCTGGCTCTTTGAACAAGGTTCAGAAAATGGGTCACTTTGAAGATCATCTGCACTCTGCAGCTTTAAGGATCCAAAAGAAATATCGTGGGTGGAAGGGAAGAAAAGAATATTTGAAGATCTGTAAGCGTATTGTAAAAATTCAGGCCCATGTTAGAGGACACCAAGTTCGTAAGCAGTACAAGAAGGTTGTTTGGTCTGTTAGCATTGTAGAGAAAGCAATACTGCGTTGGAGGCGAAAAAGAGCTGGTCTGCGAGGATTCCGAGTTGGGCAGCAAGTTGGCATTATGGCTCCAGGTGCTGACAAAAGTGATGAATACGAATTTCTGAGTATTGGGCGGAGACAGAAATCTGATGATGTTAATAAGGCTTTGGCTAGAGTTAAGTCCATGGTTTATCACCCAGAGGCACGTGATCAGTATATGAGGCTTGTCATGAAATTTCAGAATTTCAAGATTGATGATGGGGGAAGCAGTTAG 2976 0.4177 MGEGRKYILNKQLDLDEILREAEYRWLRPPEICEILRNYQKFELTPDPPIRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYWMLDEKLEHIVLVHYREVKEGYKAAVSHLPVDPVPLVGSPQSGFARVNSTLSLAQTPYASSAYRVYFNGRALSSEDEDVDSTCGHQASSYTQSVSSSLPQSALLFAHEATGVSQFSRSPCNSWSSSLPSFCPGNFSSPWPLNQNSSRKAVNIHDRNLNVEGSSECFKADFIVHKLGDARVDADSTMQDAVTCRNRLTTDMYLQSVIGVSKMVNQEQKDHDLNSYYIQLQDPTDHPAAESSTVLVEQKLKHGSKYNGESDHFKSGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWNTLDAHNGDKEVSSLHMQLDIDSLGPSLSQEQLFSIHEFSPDWAYAGVKTKVLIVGTFFGSKKLSTETKWGCMFGEIEVSAEVLTDNVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFEYRENPTVGPMGIKITPKDELCLQLRLLRLLDLGPDKNWLNCSVSQCEKCKLKEKMYSIRDEGGISQDAFKINESDYASHRDVLVQRFLRDKLYEWLVFKVHEEGKGPHMLDNESQGVIHLAAALGYAWAMGPLAVAGVSPNFRDARGRTGLHWASYFGREETVIALIKLGAAPGAVEDPTSAFPQGLTAADLASSRGHKGIAAYLAEANLTSHLLTVNVNEMDNIAAARAADSAFETAQADSSHMTMDEQRYLKESLVVFRKSAHAAALIQAAFRARSFRQRQLTNASVDIPEAVVNLVAGSLNKVQKMGHFEDHLHSAALRIQKKYRGWKGRKEYLKICKRIVKIQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRKRAGLRGFRVGQQVGIMAPGADKSDEYEFLSIGRRQKSDDVNKALARVKSMVYHPEARDQYMRLVMKFQNFKIDDGGSS 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1236 991 Gene3D - 847 897 - -
Dere14g1236 991 ProSiteProfiles Ankyrin repeat region circular profile. 680 705 - -
Dere14g1236 991 SMART CG_1_2 18 136 IPR005559 GO:0003677
Dere14g1236 991 SMART iq_5 796 818 IPR000048 GO:0005515
Dere14g1236 991 SMART iq_5 872 894 IPR000048 GO:0005515
Dere14g1236 991 SMART iq_5 849 871 IPR000048 GO:0005515
Dere14g1236 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 796 900 IPR027417 -
Dere14g1236 991 Pfam IPT/TIG domain 450 535 IPR002909 -
Dere14g1236 991 Pfam IQ calmodulin-binding motif 876 894 IPR000048 GO:0005515
Dere14g1236 991 Pfam IQ calmodulin-binding motif 851 870 IPR000048 GO:0005515
Dere14g1236 991 ProSiteProfiles IQ motif profile. 875 901 IPR000048 GO:0005515
Dere14g1236 991 ProSiteProfiles Ankyrin repeat profile. 680 712 IPR002110 GO:0005515
Dere14g1236 991 FunFam Calmodulin-binding transcription activator 2 849 897 - -
Dere14g1236 991 Gene3D - 616 784 IPR036770 -
Dere14g1236 991 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Dere14g1236 991 SMART ANK_2a 680 709 IPR002110 GO:0005515
Dere14g1236 991 SMART ANK_2a 719 748 IPR002110 GO:0005515
Dere14g1236 991 ProSiteProfiles IQ motif profile. 850 879 IPR000048 GO:0005515
Dere14g1236 991 SUPERFAMILY Ankyrin repeat 633 744 IPR036770 -
Dere14g1236 991 Gene3D Immunoglobulins 443 542 IPR013783 -
Dere14g1236 991 FunFam Calmodulin-binding transcription activator 2 443 540 - -
Dere14g1236 991 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 981 - -
Dere14g1236 991 SUPERFAMILY E set domains 450 536 IPR014756 -
Dere14g1236 991 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Dere14g1236 991 CDD IPT 449 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1236 Dere-ChrDere14 12355473 12362663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1236 59 977 CAMTA Transcription Factor Family AT2G22300 39.425 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dere14g1236 CG-1 3.5e-49 No_clan