Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1225 ATGATTGTGAGCCAGAATATGGTAGCCGAAGCGGACATTATCTGCCAGCAGGGCATTCCTAGGATAGATGTTAAGTATCATCTTTGCGTAGCACAAGAACACAACGTCAAGGCTGAGGTCCCTCACACCTCGCCGTCTGCCCCGATCTTTGGCGAAGTACGGGTTTCATGTGAACCCATTTCTACTGAAACCTCTCGCTTCGATTCGGTTGTGACGTGCTCTGAGATCATTAAAGATCCCATTTTAGAGACCTCTGTAACCAACTTTAACCCAAATGTTCGTTCTGGTAGCTGTGCTGAAATTGGACCCCGGGGATCTATGGATGATGAACACATTCGAATCGATGATCTAGCTGCCCACCTTGGATTTGTGTTCAAGTACCCTATACCAAGTGCATTTTATGCAGTTTTCGATGGTCATGGAGGGCCTGATGCAGCTGCTTTCATTAAGAGAAATGCTATGACGTTATTTTTTGAAGATGCTAATTTGCTGCAATCTTATGATACTGATGCATTCTTTCTGAAGAAGTTGGAGGATTCTCATCGGAGAGCTTTTTTACTTGCTGACCTTGCCTTGGCTGATGAACAAAGTGTTAGTAGTTCCTGTGGGACAACAGCATTAACAGCTGTTATAATTGGAAGGCAATTGCTAGTTGCTAACGCTGGTGATTGTCGAGCAGTACTTTGCAGGAGAGGACTAGCTATAGAGATGTCTCAGGATCATAGACCTAGTTATTTACCGGAACGGAGGAGAGTGGAGGAGTCAGGTGGTTTTATTGATGATGGATATCTAAATGGTCATCTTTCTGTCACCCGAGCCCTTGGGGATTGGTACTTAAAATTTCCACTTGGTTCTGCATCACCTCTTATTGCTGAGCCGGATTTTCAGCAGGTTACATTGACAGAGGATGATGAATTCTTGATCATTGGTTGTGATGGGATTTGGGATGTGATGACAAGCCAGCAAGCAGTTAGTCTTGTCCGACGTAGGTTAAGAAGGCATGATGATCCCCAGCTATGTGCCAGGGAACTAGTCAATGAGGCATTGCGCCTTAATACATCTGATAATCTCACAGTGATTGTTATATGTTTGTCTTCTGTTGGAAGCATCATTGAAACATGTCCACCTCAAAGGAGAAGATTCAGAGCTTCCAGTCTGCCTGAAGAAACCCGGAACAGGTTGAACAGCTTGCTAGAGGGAAATTGA 1206 0.4444 MIVSQNMVAEADIICQQGIPRIDVKYHLCVAQEHNVKAEVPHTSPSAPIFGEVRVSCEPISTETSRFDSVVTCSEIIKDPILETSVTNFNPNVRSGSCAEIGPRGSMDDEHIRIDDLAAHLGFVFKYPIPSAFYAVFDGHGGPDAAAFIKRNAMTLFFEDANLLQSYDTDAFFLKKLEDSHRRAFLLADLALADEQSVSSSCGTTALTAVIIGRQLLVANAGDCRAVLCRRGLAIEMSQDHRPSYLPERRRVEESGGFIDDGYLNGHLSVTRALGDWYLKFPLGSASPLIAEPDFQQVTLTEDDEFLIIGCDGIWDVMTSQQAVSLVRRRLRRHDDPQLCARELVNEALRLNTSDNLTVIVICLSSVGSIIETCPPQRRRFRASSLPEETRNRLNSLLEGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1225 401 ProSiteProfiles PPM-type phosphatase domain profile. 94 364 IPR001932 -
Dere14g1225 401 SMART PP2C_4 84 362 IPR001932 -
Dere14g1225 401 Pfam Protein phosphatase 2C 98 356 IPR001932 -
Dere14g1225 401 FunFam Probable protein phosphatase 2C 22 79 367 - -
Dere14g1225 401 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Dere14g1225 401 Gene3D - 79 367 IPR036457 -
Dere14g1225 401 SUPERFAMILY PP2C-like 85 366 IPR036457 -
Dere14g1225 401 CDD PP2Cc 93 364 IPR001932 -
Dere14g1225 401 PANTHER PROTEIN PHOSPHATASE 2C 90 362 IPR015655 GO:0004722|GO:0006470
Dere14g1225 401 SMART PP2C_SIG_2 109 364 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1225 Dere-ChrDere14 12090167 12092061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1225 1 400 PP2C-type Phosphatase Gene Family AT1G48040 55.721 1.51e-142 409