Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1212 ATGCAGCTTCACACTTTCAACAATTCCTCCTCTCTCCACTTTCTGGAAGCTTATTCAAGTGATCCTCTGAGAAGCATGGAAGAAAACCTACCTCCTGGGTTCAGATTCCATCCCACAGATGAAGAGCTCATCACATATTATCTAACAAGGAAGGTGTGCGATACCAGTTTCACATCCAGAGCTATAGCAGTTGTTGATCTAAACAAGAATGAACCTTGGGATCTTCCAGGTAAAGCTTCAATGGGAGAGAAGGACTGGTATTTCTTCAGCTTGAGAGATAGGAAGTATCCAACAGGACTTCGAACCAACCGAGCCACGGAATCAGGGTACTGGAAAACCACTGGGAAAGACAAGGAAATATTCCGCGAAGGGGTTTTGGTAGGGATGAAGAAAACCCTAGTCTTCTATAAGGGCAGAGCTCCAAGGGGTGAGAAAAGCAACTGGGTTATGCATGAATACAGACTAGAAAATAAACACCCCTTTAGGGCTTCAAAGGAAGAATGGGTGGTTTGCAGGATCTTCCAAAAAAGCTCAGCAGCAAAGAAAACACAACAGACGTCATCCCCTCAACTATCTCTGGACTCACCTTGTGACGACAACTCCATGGTCAATGAGTTTGGTGACGTTGAGCTGCCCAATTTAAACACTATAACTGCAAATTCTTCAAGTGGGTTCACTACCTTATCGTCTCAAATTTACAACAGCGATGTTAACACAAACATGAACTTAGCCATGAATTGGCCAGCTGCAACTGACCAGCTTCCCTCTCTTCCATCTCTCCCATGGCCTTCTGGTTTGCTGAATCCAAACCTTTCTGTGAATTCCTTGCTTCTCAAGGCATTACAGCTTCGGACTTGTCAACAAAGAGAAACTGCAACCACAGATCATTTTGCTTCTTATATGCCACCACAAGGAGTTTCCCAAGTAATGGGAACTCATCATCTCAGTTCAAATCTCAGACTGGGTGCTTCTTCCTCATCCGAAGTTTTAGAATGTATGCCACAGCAACAGCAACAACAGCAACAGCAACAGCAGCAGCAGCAACCTTTCAATAATTTGGACTCCATTTGGTGA 1074 0.4423 MQLHTFNNSSSLHFLEAYSSDPLRSMEENLPPGFRFHPTDEELITYYLTRKVCDTSFTSRAIAVVDLNKNEPWDLPGKASMGEKDWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFREGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHPFRASKEEWVVCRIFQKSSAAKKTQQTSSPQLSLDSPCDDNSMVNEFGDVELPNLNTITANSSSGFTTLSSQIYNSDVNTNMNLAMNWPAATDQLPSLPSLPWPSGLLNPNLSVNSLLLKALQLRTCQQRETATTDHFASYMPPQGVSQVMGTHHLSSNLRLGASSSSEVLECMPQQQQQQQQQQQQQQPFNNLDSIW 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1212 357 FunFam NAC domain-containing protein 100-like 39 180 - -
Dere14g1212 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 26 313 - -
Dere14g1212 357 Pfam No apical meristem (NAM) protein 31 155 IPR003441 GO:0003677|GO:0006355
Dere14g1212 357 SUPERFAMILY NAC domain 26 176 IPR036093 GO:0003677|GO:0006355
Dere14g1212 357 MobiDBLite consensus disorder prediction 326 357 - -
Dere14g1212 357 Gene3D NAC domain 39 181 IPR036093 GO:0003677|GO:0006355
Dere14g1212 357 ProSiteProfiles NAC domain profile. 30 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1212 Dere-ChrDere14 11966244 11969955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1212 26 357 NAC Transcription Factor Family AT3G18400 58.480 3.77e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere14g1212 NAM 4.6e-40 No_clan