Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1207 ATGGCTGAGTTTACAGCAGATTTGCAAGGCTTTAGACCATCCTTTCATTTATTAGATATTGATCCAAGCATGGAACTGATACATCAATTCACAGGGATGAATCCGCATGTCCTGGACAACTCAAATCTGAATTTGCAGAGCTTCCTGCCTTTCTCCTGTGATACCTTCCTGGGCTCTCCAGAACCTCAATTTCCAAGAAACTTGGAAGATAATTTTCCGGGCCTCGCCCATCATGTCAACCACAGTTCTATATCAGTTTCTCTGCCTGCTTTTCCTGTAGAGAATGAAACCCATGAAAGTAAAAAGAGGAAATCAATGGATATGCCAGAGACCAGTTCTGAAAATTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGATGAAACATAGTTCTGGAAGAAGTAAGAGAGTAAAAAGCAATGTAACAGATGAGGAGAAACCAAAGGAAGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACTGACAGTCACAGTCTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAGTTAAGGTGCTTACAGAACATTGTCCCAGGATGTTACAAGGCCATGGGTATGGCAGTAATGTTAGATGAGATCATAAACTATGTCCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCCATGAAGCTTACAGCAGCAAGTACCTTCTACGACTTCAATTCAGAGACAGACGCATTGGAAACAATGCAGAGAGCAATGGCTTCTGAGGCGAAAGGATTATCCAAGTATGCGAGAGAAGGACATGGAGGGGTTTCTTGCTTTCAACCAACTTGGCCACTAGCCAGCCATATCGTCGACTGTCTATTCTGCGAGGATCGTTGTCGGCAAAGCCTTAAGACGATTGTCACCGGCAGAGCCTTGAGAGATTGTCGGCGGTATAGTCAAACTTCAAACTATGCAGCGCCCAACTTCGAACAATGTAGTACCCTAGCTAGCTGGTTGATCAGAATCTCAGCAGCAGTGGGAAGAGGTTGTAAAATTTCGCCGACAATTCACAAGTCATCTGCTATCCTCTATAGCATCACCAACAAAAGTCATCCCTTGTCATCTGCGTCGTTCTCCCATGATTTTCACCGACAGTGCCTTAGGTGGCTTGTCCCCTTTCCTCTGGATCGCCGCGCGACAGAGCCCTGTAGTGTCACCAGCATAAGTCGTCCCCTGCCCTCTGCGTCATCGGCATAA 1212 0.4563 MAEFTADLQGFRPSFHLLDIDPSMELIHQFTGMNPHVLDNSNLNLQSFLPFSCDTFLGSPEPQFPRNLEDNFPGLAHHVNHSSISVSLPAFPVENETHESKKRKSMDMPETSSENSTPAVSESGSKMKHSSGRSKRVKSNVTDEEKPKEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKAMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDALETMQRAMASEAKGLSKYAREGHGGVSCFQPTWPLASHIVDCLFCEDRCRQSLKTIVTGRALRDCRRYSQTSNYAAPNFEQCSTLASWLIRISAAVGRGCKISPTIHKSSAILYSITNKSHPLSSASFSHDFHRQCLRWLVPFPLDRRATEPCSVTSISRPLPSASSA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1207 403 SMART finulus 165 215 IPR011598 GO:0046983
Dere14g1207 403 MobiDBLite consensus disorder prediction 110 127 - -
Dere14g1207 403 FunFam transcription factor BEE 3-like 156 227 - -
Dere14g1207 403 MobiDBLite consensus disorder prediction 95 109 - -
Dere14g1207 403 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 226 IPR036638 GO:0046983
Dere14g1207 403 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Dere14g1207 403 Gene3D - 156 227 IPR036638 GO:0046983
Dere14g1207 403 MobiDBLite consensus disorder prediction 89 165 - -
Dere14g1207 403 CDD bHLH_AtBPE_like 149 234 - -
Dere14g1207 403 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 94 245 IPR024097 GO:0006355
Dere14g1207 403 MobiDBLite consensus disorder prediction 136 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1207 Dere-ChrDere14 11904101 11909767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1207 63 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 54.911 9.88e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g1207 None None None