Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere14g1202 | ATGGCGACGCCGTTAACGGGACTGCAGCACTTGGACGTAGGGGGAGGAGTGGCGGTGCTTTCAAATTCTGTGAACAAGGTCGATTCTTCCTCGTCTTCGCCCTCAGCCTCCAATGGTGGCTTGAACTGCTCTAAATTGGAGTCGCCAATTTTGATTTTCTTGTTCTTTCATAAAGCGATTCGAAATGAGCTTGATGCTCTTCACCGATTAGCTATGGCATTTGCCACGGGAAATCGCTCTGATATTCAGCCGCTCTTCGAACGCTATCATTTCCTCAGATCCATTTATAGACACCACTCCAATGCTGAAGATGAGGTGATTTTCCCTGCTCTTGATATACGTGTGAAGAATGTGGCGCAGACGTATTCTCTTGAACACAAGGGCGAAAGCAATCTCTTTGATCATCTATTTGAGCTGTTAAATTCTACCATCCAGAATGATGAAAGTTTCTCAAAGGAGTTAGCATCCTGCACGGGAGCTTTGCAGACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTGCTTATTGAGAAATTCTCACTAGGGGAACAGGCATCTCTGGTTTGGCAGTTTCTGTGCAGTATTCCTGTCAATACAATGGCAGAATTTCTTCCCTGGCTTTCAACATCTATATCACCTGATGAGTCTGAGGATCTGCAGAAGTGCTTAAGCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGAAGGTAGAAGTGGTGCTAACACAGTTGAAAGTTGTGTAGATAATTCTCAGGTTCAATGTAGTCCTAGCCCATTAGCCCATCCAATTGGGAAAGTAAACTGTGCATGTGAGTCTGCAACAACTGGGAAAAGGAAATATTCTGAATCTATTCTAGATGTTTCTGATACCAATGGAACACATCCTATAGATGAAATAGTGCTCTGGCATAATGCGATAAAAAAAGAGTTAAGAGAGATAGCGGTGGAGACCAGAAAAATACAACTTTCTGGAGATTTTACTAATTTATCAGCGTTTAATGAAAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCAGCCGTAGATGGAGAACTTTCTTTCTTACAGGAGCATGCTGAAGAAGAAAGTCAATTCAATGACTTCCGGTGTTTGATTGAAGGTATTCAAAGTGAAGGAGCAACATCCAATTCAGAAGCTGAATTTTATTCCAAGTTATGCTCACATGCTGATCATATAATGGAAACCATAAAGAGGCATTTCTGCAGTGAAGAAGTTCAGGTTCTTCCGCTTGCTCGGAAGCACTTCAGTTTCAAAAAACAACGTGAACTATTGTATCAAAGCCTGTGCATGATGCCTCTGAAATTGATTGAGCGTGTCCTGCCATGGTTAGTAGGATCATTAACTGATGATGAAGCAAAGATGTTTTTGAACAACATGCAACTAGCAGCTCCCAAAACAGATACTGCTCTAGTCACACTCTTCTGTGGTTGGGCTTGCAAGGCTCGTAAGGAGGGTCTGTGCTTGTCTTCAAGTGCATCAGGTTGCTGCCCTGCTAAAAAACTTGCTGATATTGAAGAAAATTGTGTTCAATCATCCTGTGCTAGTGCTTCTGCTTCTTCTTTATCTGCTAGTGGTTGCTCTGTGTCAGCTGAATCAGATGAGAACAAAAGACCAGTCAAGCGAAATACATTGGAGTTTTGCAAGAATGGAGATGTCCCTGAAACTTCAGAGACTGACAGCATGCAAAAACAATGTTGTAGTGCTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAGTAGTAGTAATCTGGGGCTGAGATCTCTTTCTACCAAGTCCTTGCGCTCCTTGTCTTTCAGCTCTTCCCCCCCATCTCTTAATTCCAGTCTTTTCATATGGGAAACAGATAACAGCTCATGTGACACTGGCTCTGCAGAAAGACCAATTGATACTATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGATGGTGATGAGACAATTCTTCGTCAATTTACTGGAAGATTTCGTCTTTTATGGGGTTTATATAGGGCTCACAGTAATGCTGAAGATGATATAGTATTCCCAGCATTGGAATCCAAAGAGGCACTTCATAACGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTGTTTGAGGATATATCCTGTGCTCTTTCTGAGCTTTCTGTACTTAATGAAAGTTTGCTGATAAGCAATATGTCAGAGGACACAAGTGAAAGTAATTTTGAAACTTCTGATGCCAGTGTTAATGATAATATCAGAAAGTATAATGAGCTAGCAACTAAACTTCAGGGGATGTGCAAATCCATAAGAGTGACCCTGGATCAGCATATTTTCAGAGAAGAGCGTGAGCTCTGGCCATTGTTTGGTAGACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACTACTGGTGCTGAAGTCCTCCAGTCAATGTTACCATGGGTAACTTCTGCACTGACTCAGGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCTACTAAGAACACCATGTTCAACGAATGGCTTAATGAATGCTGGAAAAAGAGTCCATCATCTGACTCACTGACTGAAACATCAGAGCATAGCCCTTCCCAAAGAGGTACTGAATATCAAGAAAGCTTGGACCTGAATGATCAGATTTTTAAGCCAGGTTGGAAAGATATATTTCGGATGAATCAGAATGAGCTTGAGTCAGAGATACGGAAGGTTTATCGGGATTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAACCTAATGACTAGTCGCTGGATTGCTTCCCAGCAGAAGTTACCTAAAGCTGTGGCTGGGGAGTCTTCTAATGGTGAAGAAATAGAAGGACGCTTGCCATCATTTCGGGACCCAGAGAAAAAAGAATTTGGATGTGAACATTATAAGAGAAATTGCAAACTTCGAGCTGCATGTTGTGGCAAGTTGTTTACTTGCAGATTTTGCCATGACAATGTTAGCGATCACTCAATGGATAGAAAAGCAACATCGGAAATGATGTGTATGAACTGCTTGAATATACAAGCGGTTGGGCCCATATGCATGACCCCTTCATGTAATGGACTTTCAATGGCAAAATATTATTGCAACATATGTAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATATTGCAATTTATGCCGAGTGGGGAGAGGGCTTGGAATCGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATTAAATCGACATCTCACAAGTGCCTGGAGAAAGGTTTGGAAACAAACTGTCCAATTTGCTGTGACTTCTTATTTACATCAAGTGCTACAGTCAGAGCTCTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGCATACACGTGTAGTCACTACACATGTCCAATTTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGCATGCTCGATGCTTTGTTGGCTGCTGAGGAGCTTCCTGAAGAGTACAAGGACCGATATCAGGATATACTGTGCCATGACTGTGATCGAAAGGGCACTTCAAGATTCCACTGGTTATATCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTGATCAAGTCTGAGTCAACAAATTCCCTCTGCTCCTAG | 3747 | 0.4169 | MATPLTGLQHLDVGGGVAVLSNSVNKVDSSSSSPSASNGGLNCSKLESPILIFLFFHKAIRNELDALHRLAMAFATGNRSDIQPLFERYHFLRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSTIQNDESFSKELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSLGEQASLVWQFLCSIPVNTMAEFLPWLSTSISPDESEDLQKCLSKIVPEEKLLQKVIFTWMEGRSGANTVESCVDNSQVQCSPSPLAHPIGKVNCACESATTGKRKYSESILDVSDTNGTHPIDEIVLWHNAIKKELREIAVETRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNDFRCLIEGIQSEGATSNSEAEFYSKLCSHADHIMETIKRHFCSEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTDDEAKMFLNNMQLAAPKTDTALVTLFCGWACKARKEGLCLSSSASGCCPAKKLADIEENCVQSSCASASASSLSASGCSVSAESDENKRPVKRNTLEFCKNGDVPETSETDSMQKQCCSARSCCVPGLGVSSSNLGLRSLSTKSLRSLSFSSSPPSLNSSLFIWETDNSSCDTGSAERPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCALSELSVLNESLLISNMSEDTSESNFETSDASVNDNIRKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKKSPSSDSLTETSEHSPSQRGTEYQESLDLNDQIFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKLPKAVAGESSNGEEIEGRLPSFRDPEKKEFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLNIQAVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPYCNLCRVGRGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYKDRYQDILCHDCDRKGTSRFHWLYHKCGFCGSYNTRVIKSESTNSLCS | 1248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere14g1202 | 1248 | Gene3D | - | 1203 | 1245 | - | - | |
Dere14g1202 | 1248 | SUPERFAMILY | RING/U-box | 1129 | 1184 | - | - | |
Dere14g1202 | 1248 | Gene3D | nmb1532 protein domain like | 309 | 456 | - | - | |
Dere14g1202 | 1248 | Gene3D | nmb1532 protein domain like | 47 | 198 | - | - | |
Dere14g1202 | 1248 | CDD | Hr-like | 309 | 438 | - | - | |
Dere14g1202 | 1248 | SMART | ring_2 | 1132 | 1173 | IPR001841 | - | |
Dere14g1202 | 1248 | MobiDBLite | consensus disorder prediction | 889 | 912 | - | - | |
Dere14g1202 | 1248 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1127 | 1176 | IPR013083 | - | |
Dere14g1202 | 1248 | FunFam | Zinc finger protein-related isoform 1 | 1127 | 1176 | - | - | |
Dere14g1202 | 1248 | ProSiteProfiles | Zinc finger RING-type profile. | 1132 | 1174 | IPR001841 | - | |
Dere14g1202 | 1248 | CDD | Hr-like | 658 | 818 | - | - | |
Dere14g1202 | 1248 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 699 | 1244 | - | - | |
Dere14g1202 | 1248 | Pfam | Ring finger domain | 1131 | 1173 | IPR001841 | - | |
Dere14g1202 | 1248 | SUPERFAMILY | CHY zinc finger-like | 996 | 1059 | IPR037274 | GO:0008270 | |
Dere14g1202 | 1248 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1068 | 1131 | IPR017921 | - | |
Dere14g1202 | 1248 | Gene3D | nmb1532 protein domain like | 651 | 890 | - | - | |
Dere14g1202 | 1248 | ProSiteProfiles | Zinc finger CHY-type profile. | 996 | 1065 | IPR008913 | GO:0008270 | |
Dere14g1202 | 1248 | Pfam | CHY zinc finger | 1003 | 1078 | IPR008913 | GO:0008270 | |
Dere14g1202 | 1248 | CDD | Hr-like | 52 | 178 | - | - | |
Dere14g1202 | 1248 | SUPERFAMILY | Zinc hairpin stack | 1069 | 1125 | IPR037275 | - | |
Dere14g1202 | 1248 | Pfam | Hemerythrin HHE cation binding domain | 306 | 440 | IPR012312 | - | |
Dere14g1202 | 1248 | Pfam | Hemerythrin HHE cation binding domain | 54 | 180 | IPR012312 | - | |
Dere14g1202 | 1248 | Pfam | Hemerythrin HHE cation binding domain | 656 | 819 | IPR012312 | - | |
Dere14g1202 | 1248 | Pfam | Zinc-ribbon | 1179 | 1236 | IPR039512 | - | |
Dere14g1202 | 1248 | CDD | RING-H2_Pirh2-like | 1131 | 1174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere14g1202 | Dere-ChrDere14 | 11857440 | 11867668 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere14g1202 | 1 | 1248 | C2H2 Transcription Factor Family | AT3G18290 | 68.384 | 0.0 | 1736 |