Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1198 ATGGACGTCAAACTGGATTCCCAGACTTTCCTCCTCACACGCTTAATACTCACCATCTCCTTCTTCTTCATACTATCCCACACCAACGAAGCTAGCAGTTACTCGACGTGCAATCACACCTACAATTGTGGAAATATCACCAACATCTCTTACCCTTTCTGGGGACAGGATCGACCCCGTTATTGTGGTAGCAGCGACCAATTCGAGCTCACTTGTGATGATGGAATTACTTTCATTGAAGTGGGTCACCAAAAGTTCAGGGTGGTTTCCATTAACCTAGCATTTTACTCCATGAGGTTGGTTCCAACTGACCTCTCAGTTGCTTGTCCTAATTGGCATTTTACTAACATTTCCTTGGATCCTACTCTCTTCCGCTCTGATGATTTGTCAGTTCAGAACTTAAGTATATTCTACGATTGCCCCTCTCAAGTTTCAAGCCCCAAAAACATTACTTGCAAGCCTGATCAGAGGCGTAAAGTTGCTTTCTTTGCGAGGCAAGATGAGCTGCAGAAATTGCCGACGCTTTTGAAATGTGGGGTTCATATTCAAATTCCGGTTCAAGCTGGGATTCCTGAGGATGAAGGAAAGGATTGGCATTGGCTGAACAAGTCTTTAAGTAGGGGGTTCGTTGTTCAATATATAGCAGACTGGCATCACTGCCTAGCATGCGAATCGTCCGGAGGAATATGTGGGACTAAGATCAATGAGGCTTCTCAATTCTACTGTTATTGCCAGAACGGAATTCGTGCTTATTCCTGTCCTAAAAGAAAACAAACTTGCAAGAATGGAAGTTGGCCTACTTCTCATGTTGTAAAGTGTGGTGGAAAATTCATCACACCAAAACATACCAACCACTTTGAAATTTCCCATAATATGCTTTCCTCATATGCCTCTTCTCCTCCTCTCTTCCTTTCTACCTTCCCTTCATACCACATGCACCAAATGATCCTCCAAATCTTGTTCCGTTACCATAAACCTCCTCATTTATTCATTATTAATATTATCACTATCTCCATCTTCATGACTGCTGCTGTTCTATCTGCTAATCCGAAGTTTGAGGCATGTGCACCCAAAAGCTGTGGGAATGGTCCCATCATAAAGTACCCCTTCTGGATTTTTAATGAACAAGAAAAACTTTGTGGCTATCCTCACTTTGAGATCAGATGCCATCACAAACATCCAATTCTCAGAATCCCTGATCATGATTTTCTAGTTAAAGATATATCATACTCTTACTCTTCGTTTCTCGTTGCCAACATTGCTGTCTATGAGGAGAAGTGTCCTGCTCCCATGTATAATTACAGCCTTGACTTTGATCAAACTCCGTTTAAGTATAGTTCTGACAATTTCAATATGTCTTTCTTCTACAACTGTACGACAAAACCCATAGATTATCCCACTTATGAAGTAGACTGTGCTGAAAATGCTACCCATTATTCTTTTGGGGTTTTCCATAAGGAGGCACTGCAGAACGAAAACTACTTCAATGCGTGCCAGTTCATGGTTGAGGTTCCCGTGAAAATTAATGCTTCCGTTAATTTCACGACCTTATTGAGAATGGATTACACTGAAATTTTGAAAACGGGGTTTCTTGTGAATTGGTCTGCTCCTGACTGCCAGCACTGTGAGAAAAGTGGAGGACGCTGTGGATTTGATGACTATAAGTTTCTCTGCTTATGCAAAGATAAGCCTCATCTCAAAACTTGTGACGATGGTGCTGCTTCTTCTTCATTCAGCGTAATTGTTATGAGCATAGCTTTATATTTCTACCTGCGCCGAAAGAATAATCGGTATGCAAAATCATACGTACAATCTCAGAGTCGGACCATATCTTCGGATTCCTCTATAAAGGATGTTGAGAAAGGAAGTAAATACTTTGGAGTCCACCTCTTCACCTATACTGAACTTGAAGAGGCCACTGACAACTTTGATTCAGCCAGAGAACTTGGAGATGGGGGTTTTGGAACAGTTTATTGTGGAAAACTAGGGGATGGGCGTACAGTTGCAGTGAAGAGATTGTATGAGAACAACTGCAGGAGAGTTGAGCAATTCATGAATGAAGTGGAGATCTTAACTCGTTTGCGCCACCATAACCTTGTCCAACTTTACGGGTGCACTTCTCGCCATAGCCGCGAACTTCTGCTAGTATATGAATACATTCCTAATGGAACTGTTGCTGATCATCTTCATGGCGAGAGAGCAAAACCTGACCCACTCCCATGGCATACCAGAATGAATATAGCCATAGAGACTGCAAGTGCATTGGCATATCTTCATGCATCTGACATCATTCACCGTGATGTGAAAACCACTAACATCCTTCTTGACAATCATTTTGTTGTGAAAGTAGCAGATTTTGGACTTTCTCGTCTCTTCCCTACTGATGTCACACACATCTCAACAGCTCCACAGGGAACTCCTGGGTATGTGGATCCAGAATACCATCAGTGCTACCAGCTTACTGACAAGAGTGATGTGTACAGTTTTGGAGTGGTGCTCATTGAGCTGATATCATCAATGCCTGCAGTTGATATCACGAGGCATACGCATGAGATAAATTTGTCAAACATGGCCATTAAGAAGATTCAAAATGGGGAATTGCATGAGCTTGTGGACCCAACTCTTGGGTTTGAAGCAGATCACAAGGTGAGGAAAATGATAAATGGTGTGGCAGAGTTGGCTTTTCAGTGCTTGCAGAGCATGAAAGATGTGAGGCCGTCCATGGAAGAAGTGGTGGAAAGACTGAGGGAAACACAGAATGATGAGAAAGATAAAACAAAAGCAGAGGAGATGGATATCACAGCAGATCATGTCGTGTTGCTGAAGAATGAACCGCCTCCACCATCACCTGATTCAAATATGAGGAGCACAGCTACGACTCCGTATGCTAGCGGATAA 2898 0.4251 MDVKLDSQTFLLTRLILTISFFFILSHTNEASSYSTCNHTYNCGNITNISYPFWGQDRPRYCGSSDQFELTCDDGITFIEVGHQKFRVVSINLAFYSMRLVPTDLSVACPNWHFTNISLDPTLFRSDDLSVQNLSIFYDCPSQVSSPKNITCKPDQRRKVAFFARQDELQKLPTLLKCGVHIQIPVQAGIPEDEGKDWHWLNKSLSRGFVVQYIADWHHCLACESSGGICGTKINEASQFYCYCQNGIRAYSCPKRKQTCKNGSWPTSHVVKCGGKFITPKHTNHFEISHNMLSSYASSPPLFLSTFPSYHMHQMILQILFRYHKPPHLFIINIITISIFMTAAVLSANPKFEACAPKSCGNGPIIKYPFWIFNEQEKLCGYPHFEIRCHHKHPILRIPDHDFLVKDISYSYSSFLVANIAVYEEKCPAPMYNYSLDFDQTPFKYSSDNFNMSFFYNCTTKPIDYPTYEVDCAENATHYSFGVFHKEALQNENYFNACQFMVEVPVKINASVNFTTLLRMDYTEILKTGFLVNWSAPDCQHCEKSGGRCGFDDYKFLCLCKDKPHLKTCDDGAASSSFSVIVMSIALYFYLRRKNNRYAKSYVQSQSRTISSDSSIKDVEKGSKYFGVHLFTYTELEEATDNFDSARELGDGGFGTVYCGKLGDGRTVAVKRLYENNCRRVEQFMNEVEILTRLRHHNLVQLYGCTSRHSRELLLVYEYIPNGTVADHLHGERAKPDPLPWHTRMNIAIETASALAYLHASDIIHRDVKTTNILLDNHFVVKVADFGLSRLFPTDVTHISTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAVDITRHTHEINLSNMAIKKIQNGELHELVDPTLGFEADHKVRKMINGVAELAFQCLQSMKDVRPSMEEVVERLRETQNDEKDKTKAEEMDITADHVVLLKNEPPPPSPDSNMRSTATTPYASG 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1198 965 Pfam Protein tyrosine and serine/threonine kinase 646 915 IPR001245 GO:0004672|GO:0006468
Dere14g1198 965 ProSitePatterns Protein kinases ATP-binding region signature. 649 671 IPR017441 GO:0005524
Dere14g1198 965 Gene3D Phosphorylase Kinase; domain 1 614 719 - -
Dere14g1198 965 Pfam Wall-associated receptor kinase galacturonan-binding 355 418 IPR025287 GO:0030247
Dere14g1198 965 Pfam Wall-associated receptor kinase galacturonan-binding 37 101 IPR025287 GO:0030247
Dere14g1198 965 ProSiteProfiles Protein kinase domain profile. 643 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1198 965 SUPERFAMILY Protein kinase-like (PK-like) 620 916 IPR011009 -
Dere14g1198 965 SMART serkin_6 643 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1198 965 FunFam Wall-associated receptor kinase-like 20 720 928 - -
Dere14g1198 965 Gene3D Transferase(Phosphotransferase) domain 1 720 934 - -
Dere14g1198 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Dere14g1198 965 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 332 958 IPR044652 GO:0004672
Dere14g1198 965 Pfam Wall-associated receptor kinase C-terminal 165 246 IPR032872 -
Dere14g1198 965 Pfam Wall-associated receptor kinase C-terminal 477 563 IPR032872 -
Dere14g1198 965 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 615 719 - -
Dere14g1198 965 MobiDBLite consensus disorder prediction 941 965 - -
Dere14g1198 965 CDD STKc_IRAK 649 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1198 Dere-ChrDere14 11814402 11819948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1198 538 965 Receptor kinase-like Gene Family AT1G25390 55.580 3.05e-150 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dere14g1198 PK_Tyr_Ser-Thr 9.2e-48 CL0016