Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1189 ATGGATCCACCACGCCTCTCCAAGAAGACTTCTCGTTCTCTCATTACAGAAACTAACGTACATGATTGTCACGAGGTGCCTGATCAATCCAAGCTCCGTCTTATGTGCAGCTATGGCGGACACATCATGCCACGCCCACATGACATGTCCCTCCGCTATGTCGGTGGCGATACCCGCATCATAGTGGTCGACCGCCGTTCTTCCCTCAGAGACCTCTGTCTCCGTCTCTCTCGCACGCTCCTCCATGGCCGACCCTTCACCCTCAAGTACCTTCTTCCCAATGAAGATCTTGACAATCTTATATCAGTCACCACCGATGACGACCTTCAACACATGATCCAAGTGTATGATCGCGTAACTGTAGCCTCTTCTCTCAAACCTTCGCGTCTGAGGTTGTTTCTGTTCTTGGGTAAGCTAGAGACTGCGATTTCAATGGATGACACCAAGTCAGAGACATGGTTCGTGGACGCCATTAATGACTCTAGGATTCTCTCTCGGGTTCTGTCAGATTCTGCTGCTGTTGATTGCTTAGTGAACCTTGATGGGGTTCCTCCGACTCACTCTAGCAATAATTTGGAGGCTCTGGCTCGTAAAAACAAGCAGATCATGAATTTGGCTGATGCGCATTCAGTGCCTGACTCGCCTGTAAAGGACAACACTCCGTTCTCTGGGTCTTCTTCTTCCTCGCTTTCACTGGCCAGTCTGCCTCCAATTGGGGTTGATGATAGTGGCAGTAGATTGCAGCAAGAGCAGAGGCCTGGGATTCAGAAGCCGTTTCCACAAATGAACTTTGTTACAACTGAGATGACGAAGCAAGATGATGCGTATGCCATTTCCTCTGCTTCTGTAGCATCACCAGTGATGGTCTCTGGTGATAATATGAATGGGCTTAATTCTGATGCACAAGTTTCAGAGCTACCCCTTAAACCATTGCAGCTTGTGCATCCAAGGACTAGTAGTGACCCCTTAAGTTTGCTTTCTCCAGATTCAGTTGCTAGTGAAAGCAGTGTTGCATCAACAAATTATTTGTCAAAGCCTGTTTACTTCCAAGATCAAGTGCAAGCGAGCCATGCAAAAATGAGGAGTGAAATATCTGATCCTAACCCTACAATCCAGAGGCAACAAATTCAGGATTGCGGATACAGGTCACCCGCACAGTTGGATCAAAATCATCAACTTGAGCAATTTTTCCACTACATGCAGCACCCTGCAGCCACAGGTGATCAAGTGGCAATGCCATCCTACCACCCAGTTTATGCCCCACCATCACAGCATTCAATTGGTCAGCATTACCCAGTTTATGTAATTCCTGTAGGACCGACTCAACCAACTGGGGTGCCCTTAGGGAGGCCAATAATACCCCAGAGTGGTGCTGCCCCTACAGCTTACAAGGTTGCCACTCCAAGTGTTTACAGAGCCCCTCTGCCATCAAATCTTGCAGTTCTTCAACCTGCTCAATTTCAGAAACACTATGTGGGGTTTCCTCAATTCCATGGTCTGCCACAGTCCAATATTGCTTTTGCTCCCTCTGATACTACTTCTACTACTAGTTATGGGTATGAATATGGTGGGACTGGCACTCCACAACAGCAAACTACAGCTCCATTGCCTCCTCACTACCAATCAGATGCTTCAAACGATAGCATTCAGAAGCCAAAAAACTTCACCACCAGTATAAATTGA 1683 0.4742 MDPPRLSKKTSRSLITETNVHDCHEVPDQSKLRLMCSYGGHIMPRPHDMSLRYVGGDTRIIVVDRRSSLRDLCLRLSRTLLHGRPFTLKYLLPNEDLDNLISVTTDDDLQHMIQVYDRVTVASSLKPSRLRLFLFLGKLETAISMDDTKSETWFVDAINDSRILSRVLSDSAAVDCLVNLDGVPPTHSSNNLEALARKNKQIMNLADAHSVPDSPVKDNTPFSGSSSSSLSLASLPPIGVDDSGSRLQQEQRPGIQKPFPQMNFVTTEMTKQDDAYAISSASVASPVMVSGDNMNGLNSDAQVSELPLKPLQLVHPRTSSDPLSLLSPDSVASESSVASTNYLSKPVYFQDQVQASHAKMRSEISDPNPTIQRQQIQDCGYRSPAQLDQNHQLEQFFHYMQHPAATGDQVAMPSYHPVYAPPSQHSIGQHYPVYVIPVGPTQPTGVPLGRPIIPQSGAAPTAYKVATPSVYRAPLPSNLAVLQPAQFQKHYVGFPQFHGLPQSNIAFAPSDTTSTTSYGYEYGGTGTPQQQTTAPLPPHYQSDASNDSIQKPKNFTTSIN 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1189 560 PANTHER OS05G0427100 PROTEIN-RELATED 24 468 - -
Dere14g1189 560 MobiDBLite consensus disorder prediction 517 560 - -
Dere14g1189 560 CDD PB1_UP2 35 135 - -
Dere14g1189 560 MobiDBLite consensus disorder prediction 209 253 - -
Dere14g1189 560 Gene3D - 52 136 - -
Dere14g1189 560 MobiDBLite consensus disorder prediction 216 234 - -
Dere14g1189 560 SUPERFAMILY CAD & PB1 domains 48 145 - -
Dere14g1189 560 SMART PB1_new 46 137 IPR000270 GO:0005515
Dere14g1189 560 Pfam PB1 domain 47 135 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1189 Dere-ChrDere14 11732251 11734054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1189 30 204 MAP Kinase Kinase Kinase AT1G16270 35.754 9.05e-24 104