Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1145 ATGGCCAATGGGATCCATCTACGTGAGGAGGATGATAGATATCAATGCGGAAAATTGTATATTAAGGGAGCGGAAGGGAGATCAGAATTACTCCACACATCGATGGAGAACCTGATTGGCCTTCTAAGGATTCGCGTCAAGCGTGGTGTCAACCTCGCTGTTCGTGATGTTCGTAGCAGCGATCCTTACGTTATCGTAAAGATGGGCAAGCAGAAACTTAAGACTCGGGTAATAAAGAAGGATGTGAATCCTGAGTGGAATGAAGACCTCACGCTGTCAGTGACGGACCCGGATATTCCAATAAAACTGATAGTGTTTGATCATGACACATTTACCAAAGATGACAAAATGGGAGATGCAGAATTTGAGATAGGACCATTTATAGAAGCCGTGCATATGAAATTGGAAGGGCTCCCAGATGGTACTGTAATAAGAAGATTGGTACCGAACAGGCAAAACTGTCTGGCTGATGAGAGCTGCATTACTTGCAGCAATGGCAAGGTTGTCCAAGATATGGTTCTCAGATTGCGCAATGTCGAATGTGGTGAAGTTGAAATCCAATTGGAATGGATCAGGGTTCCTGGTTCTTCGATGCGTGTTAATTAA 606 0.4406 MANGIHLREEDDRYQCGKLYIKGAEGRSELLHTSMENLIGLLRIRVKRGVNLAVRDVRSSDPYVIVKMGKQKLKTRVIKKDVNPEWNEDLTLSVTDPDIPIKLIVFDHDTFTKDDKMGDAEFEIGPFIEAVHMKLEGLPDGTVIRRLVPNRQNCLADESCITCSNGKVVQDMVLRLRNVECGEVEIQLEWIRVPGSSMRVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1145 201 SMART C2_3c 41 136 IPR000008 -
Dere14g1145 201 Pfam C2 domain 40 126 IPR000008 -
Dere14g1145 201 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 37 196 IPR044562 -
Dere14g1145 201 CDD C2_ArfGAP 39 182 - -
Dere14g1145 201 ProSiteProfiles C2 domain profile. 27 137 IPR000008 -
Dere14g1145 201 Gene3D C2 domain 35 199 IPR035892 -
Dere14g1145 201 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 133 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1145 Dere-ChrDere14 11306705 11308423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1145 72 195 C2H2 Transcription Factor Family AT1G70790 60.317 1.14e-49 156