Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1142 ATGAGGATCAGAAAGTCAAAAATACCCTTCAATTTGAAGATAAAAAATAAACGACGTGCTGGAAACCCCGAATCGAGCAAGAAGGACGAAGCCTACTGGTGTCGTCGCTCTATTCCAGCGCTTGAAGCTTTCTCCTGTGCATATTCCGGCAACGATAAGCAAACTAATCCGAGGGACCAGAAAGAGGAGATCAAAATGGTAGTAATGTTAACACAATATGACAGATTCTCAATGGATTTTGTGATGGGAGGTGTAGCAGCTATTATATCTAAGAGTGCAGCAGCACCAATAGAGAGAGTTAAGCTTTTATTGCAAAACCAAGGGGAAATGATAAAGAGAGGACAACTCAAGAGACCATATATGGGTGTATCTGATTGCTTTAAGAGGGTTTTGAGGGAGGAGGGTCTTTTTGCCTTTTGGAGAGGTAACCAGGCCAATGTTATACGGTATTTCCCAACACAAGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGCAGCGCTGCAGGAGCAACTACTTCCGTACTTTTGTATCATCTAGATTATGCACGTACACGATTGGGCACTGATGCATTAGAGTGCCCTGTTAATGGTCAGCGCCAGTTTAAAGGGCTAGTTGATGTATATCGTAAAACCTTGTCAAGCGATGGAATTGTTGGCTTGTACAGGGGATTTGGGGTCTCAATAATGGGAATCACCATGTATCGAGGCATGTACTTTGGGATCTATGACACCATGAAACCTGTTGTTTTAGTTGGGCCTTATGAGGGTAATTTTTTTGCTAGTTTCTTGCTGGGTTGGAGTATCACGTCCCTTGCTGGGGTTTGTGCCTACCCTTTTGATACTCTACGACGGAGAATGATGTTAACATCTGGACAGCCAAATAAGTATCGTAATACGTTGCATGCTTTTCATGAGATTGTTCGACATGAGGGTTTCTTAGCTCTATTCCGAGGAGTCACTGCAAACATCCTTCTTGGTGTGGCTGGAGCTGGGGTACTAGCGGGATATGATCACCTGCATCGGATCTCATCCAGACACGGTCTCTTTAAAGTGACAAAACAGGGAGTTTCGAAATGA 1146 0.4337 MRIRKSKIPFNLKIKNKRRAGNPESSKKDEAYWCRRSIPALEAFSCAYSGNDKQTNPRDQKEEIKMVVMLTQYDRFSMDFVMGGVAAIISKSAAAPIERVKLLLQNQGEMIKRGQLKRPYMGVSDCFKRVLREEGLFAFWRGNQANVIRYFPTQAFNFAFKGYFKSIFGHSKERDGYIKWFAGNVASGSAAGATTSVLLYHLDYARTRLGTDALECPVNGQRQFKGLVDVYRKTLSSDGIVGLYRGFGVSIMGITMYRGMYFGIYDTMKPVVLVGPYEGNFFASFLLGWSITSLAGVCAYPFDTLRRRMMLTSGQPNKYRNTLHAFHEIVRHEGFLALFRGVTANILLGVAGAGVLAGYDHLHRISSRHGLFKVTKQGVSK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 244 262 IPR002067 GO:0055085
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 79 92 IPR002067 GO:0055085
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 142 162 IPR002067 GO:0055085
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 92 106 IPR002067 GO:0055085
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 194 212 IPR002067 GO:0055085
Dere14g1142 381 PRINTS Mitochondrial carrier protein signature 288 310 IPR002067 GO:0055085
Dere14g1142 381 Gene3D Mitochondrial carrier domain 77 370 IPR023395 -
Dere14g1142 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 167 IPR018108 -
Dere14g1142 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 279 365 IPR018108 -
Dere14g1142 381 ProSiteProfiles Solute carrier (Solcar) repeat profile. 179 271 IPR018108 -
Dere14g1142 381 PRINTS Adenine nucleotide translocator signature 76 88 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 PRINTS Adenine nucleotide translocator signature 179 192 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 PRINTS Adenine nucleotide translocator signature 153 165 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 PRINTS Adenine nucleotide translocator signature 284 300 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 PRINTS Adenine nucleotide translocator signature 120 141 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 FunFam ADP,ATP carrier protein ER-ANT1 77 371 - -
Dere14g1142 381 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 66 369 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Dere14g1142 381 Pfam Mitochondrial carrier protein 280 365 IPR018108 -
Dere14g1142 381 Pfam Mitochondrial carrier protein 180 271 IPR018108 -
Dere14g1142 381 Pfam Mitochondrial carrier protein 76 170 IPR018108 -
Dere14g1142 381 SUPERFAMILY Mitochondrial carrier 75 361 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1142 Dere-ChrDere14 11286126 11292485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1142 67 369 Antiporters AT5G17400 78.218 2.15e-174 486