Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1136 ATGATGGCAAGGGTAAGGGTAGATACCTTCAGCCTACTCAAACTCATCTTTTCTTCTTTATCCATCTCTTCATATAACCTAATTCCTTGTCCCTACCTCCAGCCTCACTCAGACAAAGAATTTCTAATCAAGATGATGGGTAACGGCGACCCCAATTACAGCGAAGACGATGGCAAGGGCTATGCTCTCAGCGGAAAGATTATGCTTAGCGCCATCGTCATTTTGTTCTTCGTTGTCATCCTAATGGTTTGCCTCCACCTCTATGCTCGCTGGTTCATTGTACGCGCTCGCCGCCGCCATCTCCGCCGCCGTCATCTCCGCCGTCGCACACAACTCGTCTTCTACGTCGACCCCGCCTCTTCTGCCGTGGCCTCCTCGCGCGGGCTGGATTCTTCTCTGCTTTTGTCTCTGCCTGTCTTCGTCTACTCCTCCAAGACCCACCCCGAGCCCGTTGAATGCCCAGTCTGCTTGTCCGAGTTCGAAGAGGGCGAAACGGGTCGGGTTTTGCCCAAATGCAACCACAGTTTCCATATTGACTGCATCGACATGTGGTTCAAGACTCACTCGACTTGCCCCGTTTGCAGGGCTCCTGTTGAACCCGCCCCCGTGGATGACAACCGACGCGAGGTGGTCATAAGTGTGTGCGAACCGGTAACTCCTGAACCCGGCTCGACTTCTGGGTTGTGCGTGGAGTGTCAGCACGAAGGGGAAGCGGAAAACCGAAGCGGCCAAACGGTTTCTTCTCCGTCTTCTTCGATTGGGTTCATGCGGAAGCCATCGTCACTCGTGGGTGTGACCGTGGAGGTGCCTAGGAGGAATGAGAGCTTCGCGGACGAGTCGAGTTGCGAGTCGCCGTCGACTCAGTCGTCTTTTAGGTCGCCGATGAGTCGTATGCGTTCATTCAAGAGAATGCTTAGCAGAGACCGGAAAGGAAACCTTTCGCCATCATCAGGTAGTGCGGTGGGATGCAGCAGCCCTGCGATTGAGTTAGAGAAGGAGCAAGGAGGACGAGATGAGACTCAGTGA 1026 0.5429 MMARVRVDTFSLLKLIFSSLSISSYNLIPCPYLQPHSDKEFLIKMMGNGDPNYSEDDGKGYALSGKIMLSAIVILFFVVILMVCLHLYARWFIVRARRRHLRRRHLRRRTQLVFYVDPASSAVASSRGLDSSLLLSLPVFVYSSKTHPEPVECPVCLSEFEEGETGRVLPKCNHSFHIDCIDMWFKTHSTCPVCRAPVEPAPVDDNRREVVISVCEPVTPEPGSTSGLCVECQHEGEAENRSGQTVSSPSSSIGFMRKPSSLVGVTVEVPRRNESFADESSCESPSTQSSFRSPMSRMRSFKRMLSRDRKGNLSPSSGSAVGCSSPAIELEKEQGGRDETQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1136 341 ProSiteProfiles Zinc finger RING-type profile. 153 195 IPR001841 -
Dere14g1136 341 MobiDBLite consensus disorder prediction 279 296 - -
Dere14g1136 341 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 56 200 IPR044675 -
Dere14g1136 341 Pfam Ring finger domain 152 195 IPR001841 -
Dere14g1136 341 MobiDBLite consensus disorder prediction 274 341 - -
Dere14g1136 341 SUPERFAMILY RING/U-box 136 201 - -
Dere14g1136 341 SMART ring_2 153 194 IPR001841 -
Dere14g1136 341 FunFam RING-H2 finger protein ATL3 120 200 - -
Dere14g1136 341 CDD RING-H2_EL5-like 152 195 - -
Dere14g1136 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 201 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1136 Dere-ChrDere14 11205903 11207028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1136 50 338 Rapid Response to Elicitors AT3G16720 51.634 3.94e-78 239