Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1115 ATGAAGATGGCGATTCCGCCCTCCCAGCTCTCCGACAATGATCGGAGCAGGTCCGAATTGCGAGCTCTCGATTGTAACCTCACTTCGCTTTGCCACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCTGACGTCGTGCTCCACGCAATGGGTTCTACTTATCACCTCCATCGTCTTATCCTCTCTCGGAGTTCCTACTTCAGGAATATGCTTCATGGCCCCTGGAAAGAAGCCAGTGCTCCTATTGTGACCCTGCATGTTGATGATAAGAATGTCAATGATGAGGCAATCACAATGGCCTTGGCATATCTATATGGGCACCACCCTAAGCTTAGTGATAGTAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTCCAGGACTTATGTGCAATATGTACAGACTTCATTATATCTGAGCTGTGGACTTCAAACTTCCTGGCTTATCAGGTATTTGCAGAGAACCAAGACTATGGCATTCATGGAGAGCGTGTTAGAAATGCTTGTTGGGGTTACCTCTGTCAAAGTGGTGGCATGGAGTTGAAGGAGGTGCTTTCTAAACTTTCGTCTCAAACATTACATGCATTACTGACCTCTGATGAACTATGGATACTGAGTGAAGAGAAACGGTTTGAACTGGCATTGCATACATTCCTGGCAAAAAATGCTCACTGGAAGGCTGAGCATCCTGAACAAGGAAGTTCTGGTTCTGAATCTGCAACTGATATCTGTTCTGATTCTGACAACATTAAAGGAAAAAGTGTAGCTGATAGCAGCACAAATAAGAGGTTGGAAACTGATCTAGGACGTTTGAATCTTAAAAGTGATCCGAAGGACACTAGCAGTCATAATATGCTAGTAGAGCTTGCAGACAGTGTGGTAAACTTCAATAGTGAGGATTCTGATTCTAATCAACTGGCACAACCAGCATCATATACCAGTTCATCAAACATGGAGCCTAGATATTCTTGCAACATGGAAGGGCCTTCATCAATCAGTAATTTGTTGTCAGAAACAGATGGGATCAGAACAGCATGTTCTTATGTTGATATGCCTCTCAGTGCTGCAGCAACTGGAGTGGCTATTGAAGGGCCATCTGAGGAGGGGTCTTGCTACCATATGGATAACAATGGTTGGTTAGTTAAGGATCAATCATGGCATTGCTTTTCATCAAATTCTTCCTGTAATGGACTCACAACCAGTGATTGGGGAAGATACAATATGCCTCTTTTTTCATGGGGTGGCCGGGTAGTTGGTAGAAGACGGCTCAAAACTCACTCCAAAGGAAAGTATGGAGTTCCTGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATTTGTCTTTTGAGGCACTTCTAAACGTCAGAAAGCAACTTGAAGAGTTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTAAGTCAGAGGGTGCAAGAAATTGCAGCTGACACATGCAAAACTTGTTGCCTTTTGAGTGTGGCATGCACTTGCCGACAGCCATTTGCATTTTCTCAGGGAGTTACTACTCCTATTTATTACATGCATGAACATAACCGGAATAATAATTCTGGGAATGTGGGAAACATATATGTTGCTGAGTCTTCACAAGGCGAAGGAAGTGGCATTTTTAGACCTGTACGAGTACATGCTATTGATGGGCTTGCAGGTATTGGTCGTGGAACTACATTTGTGCCGGCAGCTGCTTCGCCTCCTACACGTGTTGTCTTTTCTCGTGTACCAAGTGGTGTTGGCAACAGGAACTACCCTCAGTCTGCAGCTAATGATGATTCAGAGTCACAAGCTGACCACAATGGGGAACTGTCTGGGGATGGGTTGACAGGTTTGGTTGGGCTAAGTCAGGGAGGGAGTAATGGAACTAATGCACATGGAGAAATAACACAAAGGGGATATGAGATTGGGTTGCAAAACAGAATGTCTGGAACTGCTGGTGGTGGCCCAAGTACTGGTGGCATTCCCATGCAAATGTTAGAGGCACCTGAACATACCATAGGAATAGAATGGGAGAATGCTAACAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGCCATTTTCCTCCTTTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCGGAGGTGTTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATTATGAAGACCCCCAGGGACGAAGAACTGTCGGGTTATTCCTTCACCGTCGGAAAGCAGAGATTGCTGATTTACATAGAAAGGTGCATATGTATGTTGATTCTCGTGAAAAGGTCACTGCTCGTTATCAGTTGATTTGCCCATCAAAGAGGGAAGTGATGGTGTTCGGAAGCTTTAAACAAACAGGCACCCTTCTACCTAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTTTGCTATTTGACGAGCTTGCTGATCTCCTCCAAAATGGGGCCCTACGGATCATTGCTGTAGTGCAGCTTGTTTAA 2562 0.4434 MKMAIPPSQLSDNDRSRSELRALDCNLTSLCHHIQMEGFNSGSFSDVVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPIVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLSKLSSQTLHALLTSDELWILSEEKRFELALHTFLAKNAHWKAEHPEQGSSGSESATDICSDSDNIKGKSVADSSTNKRLETDLGRLNLKSDPKDTSSHNMLVELADSVVNFNSEDSDSNQLAQPASYTSSSNMEPRYSCNMEGPSSISNLLSETDGIRTACSYVDMPLSAAATGVAIEGPSEEGSCYHMDNNGWLVKDQSWHCFSSNSSCNGLTTSDWGRYNMPLFSWGGRVVGRRRLKTHSKGKYGVPGDEHEAFVNIFEGGSLLYCNLSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKTCCLLSVACTCRQPFAFSQGVTTPIYYMHEHNRNNNSGNVGNIYVAESSQGEGSGIFRPVRVHAIDGLAGIGRGTTFVPAAASPPTRVVFSRVPSGVGNRNYPQSAANDDSESQADHNGELSGDGLTGLVGLSQGGSNGTNAHGEITQRGYEIGLQNRMSGTAGGGPSTGGIPMQMLEAPEHTIGIEWENANSSSISLDLKTPLSHFPPFRFGVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNYEDPQGRRTVGLFLHRRKAEIADLHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRIIAVVQLV 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1115 853 MobiDBLite consensus disorder prediction 302 324 - -
Dere14g1115 853 SMART BTB_4 45 145 IPR000210 GO:0005515
Dere14g1115 853 Pfam BTB/POZ domain 39 143 IPR000210 GO:0005515
Dere14g1115 853 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 4 853 - -
Dere14g1115 853 MobiDBLite consensus disorder prediction 596 648 - -
Dere14g1115 853 Gene3D Potassium Channel Kv1.1; Chain A 12 179 IPR011333 -
Dere14g1115 853 ProSiteProfiles BTB domain profile. 45 115 IPR000210 GO:0005515
Dere14g1115 853 MobiDBLite consensus disorder prediction 601 616 - -
Dere14g1115 853 SUPERFAMILY POZ domain 38 143 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dere14g1115 BTB 6.5e-15 CL0033