Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1105 ATGGATTTGAGTCCCACCAAGCTCGATTATTACGATGACATGTGCAAGCTCCAATCTACTGCCACACTCCTTTCCCACTACAAGGGAGATGATGGTAGACATGCTTTAATATTAGATCGTACTATTTTCTATCCGCAAGGTGGTGGTCAGCCAGCCGACACTGGCTTCATACACATTTCTGGTTCAGACCTTAAGTTTGTGGTTCAAGACGTTCGATCGAAAGATGGGATTGTTTTCCACTATGGATTCATCGAGAATTTGGGCCAGGAATTTGAAATCAAGCATGAGAAGGGGAAGGAGGTTACACTGTCCATTGATGAGCCCAGGCGAAAGCTGAATAGCAGGTTGCATTCAGCAGGTCATTTACTTGATGTTTGTCTGCCAAGAATAGGATTGGGTCATTTAGAGCCTGGGAAAGCTTACCATTTTCCTGATGGGCCTTGGGTTGAATATAAAGGCACAATTCCACAAAATGAAATGCAGAATAAGCAAAAAGATTTAGAGTTAGAAGCTAATGGTTTAATTTCTGTGGGAAAAAAAGTTTCTGTTGATATATTACCATATGATGAAGCTGCCGAGCTTTGTGGTGGTTGCCTTCCTGATTATGTTCCCAAGGAAAGCACACCTCGCATTGTGAGGATAGGAGATAATCCTGGCTGTCCCTGTGGTGGTACCCATGTTTCTGACATTTCAGACATCATATGCATTAAGGTTTCTCAAATTCGCTCAAAGAAGGGATTGACAAAAGTCTTCTACAATCTGCATTCTGATTTCGTTGTTTCTCTTGGCTCCGTGTGCCTTGTTGTGGATCTACTGGAGACAAGCATGCTTAGTCAAGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAACAGCATAAGAAGCATCCCTTGTGAGGTTGCCAATGGCCTTAATATCCTACCTGAAATCCACAGAACAAGCAGTTTCTCGTGCTTGTCTGGCGCGGCCTTGAGTGCAAACGCTACATTAGCCAACACAAACATCTGCAATGGTGTGATAGGAGGAGAAATACTTCCAAGTTGGGACTCCCCTAATGCATTTCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCCCTGCACAGTAATATGTCAAACTCAAGTTGCAGTCCCTCCACTCCAAGTGATATGCTTGATTATGACTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCAGTTTATGATGGCTTCAATGGTAGGGATGCTGCCGACTTTCTGGCTGGTACTCTGTATGACACCATCATATCCAATTTTAATATGTTGTATTGGGAATTTGAGCCAGATTACATCAAAGCTTCTAATGATGTGAGTTTGGGTGGATCCTTTAAGTTGGATTATAGTTCCATGATTCATGAGGAGCAATCTCTATCAAGACAGGGGGTAAACAACAATTCTTATCTTGGCTGTTTGGCAACAAATAATCTATCTGCTAAGGTAGGAGCACGGTGTAAATCATTCTCAGATGGAGTACTTGATAGCCTTGAGCGTGCTCTTAGTCAGGTGGAGAACGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTATCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGATTTGTACACGCTCAATTTAGGTGACAGCAGAGCAGTATTGGCAACATGTAACACAAGTGACAAACTCAGAGCTATCCAGCTTACAGAAGGTCACACAGTTGAAAATGAAGCTGAAAGAGCTCGACTTCTGGCTGATCACCCTGATGATCCTAAGACCATTATAGCAGGAAAAGTCAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACCTGAAAAAGAAATGTCTGAATGATGCATTGATGGGAATCCTTCAAGTCAGAGATCTTAGAAGCCCACCATATATTTCCACTCAACCATCGCTGAATGTTCATAAGATTTCAAACTATGATCAATTTGTAATAGTAGGGAGTGATGGCTTATTTGACTTTTTCAGCAATGATGAAGCGGTAGAGCTTGTTGAGTCTTTTATCTTAAGCAATCCATTTGGTGATCCAGCTAAGTTTCTCATCGAGCAGCTTGTCGCAAGAGCAGCCCATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCGGCTGGGAGGAGGAGGAAGTACCACGATGACGTCACTGTGATTGTTATCAATTTTGGAATGAATCATCGGACTTCAAAAGCATCAACTTGCATCTAA 2376 0.4209 MDLSPTKLDYYDDMCKLQSTATLLSHYKGDDGRHALILDRTIFYPQGGGQPADTGFIHISGSDLKFVVQDVRSKDGIVFHYGFIENLGQEFEIKHEKGKEVTLSIDEPRRKLNSRLHSAGHLLDVCLPRIGLGHLEPGKAYHFPDGPWVEYKGTIPQNEMQNKQKDLELEANGLISVGKKVSVDILPYDEAAELCGGCLPDYVPKESTPRIVRIGDNPGCPCGGTHVSDISDIICIKVSQIRSKKGLTKVFYNLHSDFVVSLGSVCLVVDLLETSMLSQEGELKISFGYQCNSIRSIPCEVANGLNILPEIHRTSSFSCLSGAALSANATLANTNICNGVIGGEILPSWDSPNAFRKVPSSPSLSRLDILSSSLHSNMSNSSCSPSTPSDMLDYDSCTLKSMSAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAVYDGFNGRDAADFLAGTLYDTIISNFNMLYWEFEPDYIKASNDVSLGGSFKLDYSSMIHEEQSLSRQGVNNNSYLGCLATNNLSAKVGARCKSFSDGVLDSLERALSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATCNTSDKLRAIQLTEGHTVENEAERARLLADHPDDPKTIIAGKVKGKLKVTRALGVGYLKKKCLNDALMGILQVRDLRSPPYISTQPSLNVHKISNYDQFVIVGSDGLFDFFSNDEAVELVESFILSNPFGDPAKFLIEQLVARAAHSAGFSMEELMNIPAGRRRKYHDDVTVIVINFGMNHRTSKASTCI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1105 791 FunFam Similar to alanyl-tRNA synthetase 106 256 - -
Dere14g1105 791 SUPERFAMILY Translation proteins 5 84 IPR009000 -
Dere14g1105 791 SMART PP2C_4 402 776 IPR001932 -
Dere14g1105 791 FunFam Threonyl and alanyl tRNA synthetase second additional domain-containing protein 1 103 - -
Dere14g1105 791 Pfam Protein phosphatase 2C 535 740 IPR001932 -
Dere14g1105 791 SMART tRNA_SAD_4 209 251 IPR012947 GO:0004812|GO:0005524|GO:0043039
Dere14g1105 791 PANTHER ALANYL-TRNA EDITING PROTEIN 4 254 - -
Dere14g1105 791 Pfam tRNA synthetases class II (A) 33 108 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Dere14g1105 791 SUPERFAMILY ThrRS/AlaRS common domain 106 252 IPR018163 GO:0000166
Dere14g1105 791 Gene3D - 106 260 - -
Dere14g1105 791 SUPERFAMILY PP2C-like 425 779 IPR036457 -
Dere14g1105 791 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 1 238 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Dere14g1105 791 CDD PP2Cc 424 778 IPR001932 -
Dere14g1105 791 ProSiteProfiles PPM-type phosphatase domain profile. 411 778 IPR001932 -
Dere14g1105 791 Gene3D - 384 787 IPR036457 -
Dere14g1105 791 Gene3D - 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1105 Dere-ChrDere14 10958923 10968680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1105 281 791 PP2C-type Phosphatase Gene Family AT3G16560 63.250 0.0 597