Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1092 ATGGAAAACGTTGGAGGCAGTTCTTCGTCTAATAATGACAACAGTGGTGTCAAGGAGCAAGACAGGTTGTTGCCAATAGCGAATGTTGGTCGGATCATGAAGCACATACTGCCTCAGAACGCGAAAATCTCCAAAGAAGCGAAGGAAACTATGCAGGAATGTGTGTCGGAGTTCATAAGCTTTGTGACCAGCGAAGCTTCAGAGAAGTGCAGGCAGGAGAGGAGGAAGACTGTGAATGGGGATGACATATGCTGGGCCTTGGGAACACTGGGTTTTGACGACTACGCTGAGCCACTGAGGAGGTATTTGCAAAGATATAGAGACTTAGAGATAGACAGAGCAAATCATGACAGAGGAGATAGTCCCGAGGACAGGGATGACCTCTATCAAATACCCTCCAGAAAGATCAGGGAGTAG 417 0.4748 MENVGGSSSSNNDNSGVKEQDRLLPIANVGRIMKHILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRQERRKTVNGDDICWALGTLGFDDYAEPLRRYLQRYRDLEIDRANHDRGDSPEDRDDLYQIPSRKIRE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1092 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 9 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Dere14g1092 138 MobiDBLite consensus disorder prediction 1 21 - -
Dere14g1092 138 FunFam Nuclear transcription factor Y subunit B-3 12 134 - -
Dere14g1092 138 SUPERFAMILY Histone-fold 20 123 IPR009072 GO:0046982
Dere14g1092 138 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Dere14g1092 138 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Dere14g1092 138 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Dere14g1092 138 MobiDBLite consensus disorder prediction 1 18 - -
Dere14g1092 138 MobiDBLite consensus disorder prediction 112 138 - -
Dere14g1092 138 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Dere14g1092 138 Gene3D Histone, subunit A 10 134 IPR009072 GO:0046982
Dere14g1092 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1092 Dere-ChrDere14 10869859 10870275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1092 17 127 CCAAT-HAP3 Transcription Factor Family AT2G47810 72.973 3.42e-58 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Dere14g1092 CBFD_NFYB_HMF 1.3e-27 CL0012