Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1091 ATGGCAGCCAACAATTCTTACCCCGTAGCCCAAGCGTCTCCGCAGTTATATTCCACGTCTCCAAGTCGATCATTACTCATTACCTCTGTGCACTACTCAGACGAAGTCGACTTGTGGAAGACACTTGACGCATACGGGGACATCAGAGCCCTCCAGACGGACACATTGCCCTATGGATTCATTATTGTTCATTATTATAATCTCAAGCATGCTGAGACGGCATTTTCTGCCATTCGCAACTTCTACCTCCAACAATGCCGTTCACTTTTCCCTCCTCCTTGCTGGGTGTACTACGTTGTCGACGTTCCTGACTTTCATTCTCTGCCAATTTCTGATCCTCAAAACCTAGGCACCATCATCGTCTTCAATCTTGATGAGTCTATCTCCTCTCACACTCTTCAGCAGATTTTTGAGCATTATGGTCCCGTAAAGGAATGCAGATTTATACCAAGGAAACTCAGCCATAGGTTTGTGGAGTTCTATGACGTGAGAGATGCAGCTAGGGCTTTAGAGCAGATGAATGGGAAGGAAATTGCTGGTAGAACTGTTTTTATCCAGTACAGCAGGCGAGGAGGTCAGGGGAAGAATTTTATCAATGGTATCTGTGCGCCTGAGAAATCAAGAAAGCATGAATGA 636 0.456 MAANNSYPVAQASPQLYSTSPSRSLLITSVHYSDEVDLWKTLDAYGDIRALQTDTLPYGFIIVHYYNLKHAETAFSAIRNFYLQQCRSLFPPPCWVYYVVDVPDFHSLPISDPQNLGTIIVFNLDESISSHTLQQIFEHYGPVKECRFIPRKLSHRFVEFYDVRDAARALEQMNGKEIAGRTVFIQYSRRGGQGKNFINGICAPEKSRKHE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1091 211 Gene3D - 110 208 IPR012677 -
Dere14g1091 211 SMART rrm1_1 118 186 IPR000504 GO:0003723
Dere14g1091 211 SUPERFAMILY RNA-binding domain, RBD 103 194 IPR035979 GO:0003676
Dere14g1091 211 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 117 190 IPR000504 GO:0003723
Dere14g1091 211 PANTHER RNA RECOGNITION MOTIF-CONTAINING 21 196 - -
Dere14g1091 211 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 119 183 IPR000504 GO:0003723
Dere14g1091 211 SUPERFAMILY RNA-binding domain, RBD 14 85 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1091 Dere-ChrDere14 10836137 10836856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1091 119 190 Eukaryotic Initiation Factors Gene Family AT2G23350 28.947 5.80e-07 47.4