Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1082 ATGGAGATGGACTACGTGACAGAGTTTCCTCACTCTCACATGGATCGGCGTCCCAGGAAAAGGGCTAAATTAGCATGGGAATTTCCTCAAACCCACTCCAAGGCTCATTCGGGGATATATTATGGACAAGATGTTGCAAACATGACAAGCTTTGGAGCATCGAGGATAGTCCCTGACCATGCTGGCCTATTTGTGAAGGGGTTGGCTGAAAAAGGTTCCCCCCCATGGCGAGATGATGACAAAGATGGACATTACATGTTTGCACTTGGTGACAATTTGACTTCTCGATATAAGATCCTCCAGAAAATTGGAGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTACTGGTTGCCATCAAAGTTGTGCGAAGTATTAAGAAATACCGTGAAGCAGCGATGGTAGAAGTTGACGTGCTCCATTTACTTGGGAAGTATGACAGGAATGGCTGTCGCTGTGTTCAAATACGGAACTGGTTTGACTATCGTAACCATATTTGTATTGTGTTTGAGATGCTTGGACCAAGCTTATATGATTTTCTACGGAAGAACAATTATCGCCCATTTCCGGTTGATCTTGTCCGTGAGCTAGGCAGACAACTGTTGGAATGTGTAGCATTTATGCATGATTTGCGTCTCATCCACACTGACTTGAAACCTGAGAACATACTTTTTGTTTCTCCAGAATATGTAAAAGTACCTGACAACAAGGTTACATCCCGCTCTCCGAAAGAGGGAACCTTTTATAAGAGACTGCCAAAGTCAAGTGCCATTAAGGTCATTGATTTTGGTAGCACAGCCTACGAGCACCAAGATCACAACTATATTGTCTCTACTAGGCATTATCGGGCACCTGAGGTTATTCTTGGACTTGGGTGGAGTTTCCCTTGTGACATATGGAGTGTTGGATGCATCTTGGTTGAGTTATGTTCGGGAGAGGCTTTGTTTCAGACGCACGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTAGGCCCAATACCTATGCACATGTTGAAAAGAGCAGATCGGCATGCAGAGAAGTTTGTCAGAAGGAGTAGATTGGACTGGCCAGAAGGCGCAGTGTCTCGGGAAAGCATCAAGGCTGTCTTAAAACTACCTCGTCTTCCTAATCTAGTGATGCAGCACGTGGATCACTCTGCAGGGGATCTTATTGATCTCTTGCAAGGTCTACTTCGTTTTGACCCCTCCGGTAGATTGACAGCTCATGAAGCGCTCAGGCACCCCTTCTTTACCAGGGAACATTACAGGAGATTTTGA 1299 0.4511 MEMDYVTEFPHSHMDRRPRKRAKLAWEFPQTHSKAHSGIYYGQDVANMTSFGASRIVPDHAGLFVKGLAEKGSPPWRDDDKDGHYMFALGDNLTSRYKILQKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAMVEVDVLHLLGKYDRNGCRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYVKVPDNKVTSRSPKEGTFYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPIPMHMLKRADRHAEKFVRRSRLDWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLRFDPSGRLTAHEALRHPFFTREHYRRF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1082 432 ProSiteProfiles Protein kinase domain profile. 97 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1082 432 SMART serkin_6 97 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1082 432 Gene3D Phosphorylase Kinase; domain 1 84 177 - -
Dere14g1082 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Dere14g1082 432 SUPERFAMILY Protein kinase-like (PK-like) 84 428 IPR011009 -
Dere14g1082 432 Pfam Protein kinase domain 97 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1082 432 ProSitePatterns Protein kinases ATP-binding region signature. 103 133 IPR017441 GO:0005524
Dere14g1082 432 FunFam Serine/threonine-protein kinase AFC2 173 424 - -
Dere14g1082 432 Gene3D Transferase(Phosphotransferase) domain 1 151 424 - -
Dere14g1082 432 CDD PKc_CLK 84 424 - -
Dere14g1082 432 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1082 Dere-ChrDere14 10771560 10776027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1082 97 424 Core Cell Cycle Gene Families AT1G76540 25.294 1.23e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Dere14g1082 Pkinase 3.4e-48 CL0016