Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1079 ATGTTGGGAGAGGAGGGTAAGGACCGTCCCACCGCCACGGCCGCCGGTGGTGGCGGTCGGAGGACATATTCACGCTCTGTCTCTTGGACTGATCGGTCTCCGACGAAGATTAGCCCAAACCGTCGGCCGCCCACAAATAGTAAGCCTCGGCCATTATTGCCTCCTCTTCAGCCTCTCTCCATCATAAAACGAAGTGCTGAGGAGTGGCCTAGCGCGGGATCTGATGATCTTGGAATTTGGCCGCTTCCACAAACCCCAAGAGGATCCATTAAAGCCTTGGAGAGTTCTGATTCGGGTCAGCCCACAAAAGAATTTCAGTTCAAGAGGGATAAATTAGCCTTTTTTGACAAGGAGTGTTCTAGGATCGCCGAGCATATATATTTGGGGAGCGATACAGTGGCGAAGAATCACGAGCTTTTGAGGCAAAATGGGATCACGCATGTGCTCAACTGTGTTGGGTTTGTTTGCCCTGAGTATTTCAAAAGCGATTTTGTGTACAAGACACTCTGGTTGCAGGACAGCCCCAGCGAAGATATCACCAGTATTCTCTACGATGTGTTTGATTACTTTGAGGATGTTCGAGAGCAAGGCGGGCGTGTGCTTGTGCATTGTTGCCAGGGAGTTTCTCGATCATCCTCTCTGGTCATTGCATATCTTATGTGGAGGGAAGGTCAGAGTTTTGAGGATGCGTTTCAGTATGTGAAGACTGCACGAGGAGTGACCAACCCAAATATGGGTTTTACTTGTCAACTTAAGCAGTGCCAGAAACGTGTACATGCTATGCCCGCTAGTCCGAATTCTATTCGTAGGATGTATCGAATGGCCCCTCACTCACCCTATGACCCTCTTCATTTAGTCCCCAAAATGATAAACCATCCAGGTGCTCGAGCGCTTGATTCTCGTGGGGCGTTCATTATCCATGTTCCTTCTGCTATTTATGTGTGGAGTGGAAAAAATTGCAGTTCGGTGATGTCATGTAATGCAAGGGCTGCAGCACGTCAGGTCATCCGTTATGAGGGGGCTAAGGGTCCAATTCTGACCATCAGTGAAGGTGAAGAGCCTCCGGAGTTTTGGACTGTTCTTGCCAACGAGCAACTCTTATTAGGTGAAGAAAGCGTGGAGCTTGCTGAAGCTGGTATTAGTGAGGGGATTGGTTGGAGAAAAGTAAGCGAGTATGATTTGGATTTTGAAATTTTCCACAAGGCGCTTGCTGGTGGGGTTGTTCCACCTTTTTCTGTTTCTAGTGCTGGTTCAGAAACTTGCCTACCTGCCAGAGAAAATGGATGGGGAAGACTGAGGAGGAAGTTTGCTAATGGTTGCATGAAAGGATTATTCATGTCATCCTCTAAATGGAACTGCAAAGCTACTACCACTAAATCCATAGATGAATCCAGTGTGATTATGGAAGAAGAAAACCAAGATTCTGTACTTGATCCTAGTTCGTCCCCATCATCGTCGACCTTTCCCTGTGGTTCACCTGATTCTTTTGAATGTTTTCCAGATAACAGCTCAGACAGGGCAAAGGATAGTACCACCATAGAAGTCATGGATCTCTCTGTTCCTCCCACATCAGATTCTTTTTCTTGTTTTTTAGGAAGCAGCCCAAAATTCAGTTCCAAGTCCCCAACACTCTCACCCTCCAGTTCTGAGTATGCCAGTTCGTTTACATTTTCACCTTCGTCTACAAATTGGTCTGACTTGTCATTTGTGTCTTCTAGGCAGCCATCACCTTCTAGCCTGGAACCAGCTGATCCTTTTTATGTCAAAGATCTATCTTTCTCAGAAAACTCCTCTCTACTTATCAAAGAAGCTGTCTCCTCGTCTAAGGAGGAGGCATTTTCAGCTAATCACACATTGGGAGGCGCAGACACCTATCTTCCATGTAAAGGGCCTTCCCCTTCCATTGCGGAGCGCAGAGGGAGTAATCCTCCACCTCGTATGTTGCTATCCTCTGTCAACGAATCATCTCACGACCACACCAACCTGGTACGATCACAGTCATTCTCTTTACCTGACTTACATGGTAATGTGATGTACGATATTAGTTGCAAGCAATCTGATCATGAAAACAATGGAAAAGGGCCAATAGCAGATGCTGATATTAGTTCAGGCGGTGAATCGCAGAGGGACATTAATGACAGCGAGGATCATATGGTACTATGTTATAGACATAAGTAG 2178 0.4651 MLGEEGKDRPTATAAGGGGRRTYSRSVSWTDRSPTKISPNRRPPTNSKPRPLLPPLQPLSIIKRSAEEWPSAGSDDLGIWPLPQTPRGSIKALESSDSGQPTKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFTCQLKQCQKRVHAMPASPNSIRRMYRMAPHSPYDPLHLVPKMINHPGARALDSRGAFIIHVPSAIYVWSGKNCSSVMSCNARAAARQVIRYEGAKGPILTISEGEEPPEFWTVLANEQLLLGEESVELAEAGISEGIGWRKVSEYDLDFEIFHKALAGGVVPPFSVSSAGSETCLPARENGWGRLRRKFANGCMKGLFMSSSKWNCKATTTKSIDESSVIMEEENQDSVLDPSSSPSSSTFPCGSPDSFECFPDNSSDRAKDSTTIEVMDLSVPPTSDSFSCFLGSSPKFSSKSPTLSPSSSEYASSFTFSPSSTNWSDLSFVSSRQPSPSSLEPADPFYVKDLSFSENSSLLIKEAVSSSKEEAFSANHTLGGADTYLPCKGPSPSIAERRGSNPPPRMLLSSVNESSHDHTNLVRSQSFSLPDLHGNVMYDISCKQSDHENNGKGPIADADISSGGESQRDINDSEDHMVLCYRHK 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1079 725 ProSitePatterns Tyrosine specific protein phosphatases active site. 202 212 IPR016130 GO:0016311|GO:0016791
Dere14g1079 725 MobiDBLite consensus disorder prediction 709 725 - -
Dere14g1079 725 SMART VILL_6 270 364 IPR007122 GO:0051015
Dere14g1079 725 MobiDBLite consensus disorder prediction 464 491 - -
Dere14g1079 725 MobiDBLite consensus disorder prediction 23 43 - -
Dere14g1079 725 Gene3D Severin 271 366 IPR029006 -
Dere14g1079 725 ProSiteProfiles Dual specificity protein phosphatase domain profile. 118 260 IPR020422 GO:0006470|GO:0008138
Dere14g1079 725 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 177 238 IPR000387 GO:0016311|GO:0016791
Dere14g1079 725 Pfam Dual specificity phosphatase, catalytic domain 126 256 IPR000340 GO:0008138|GO:0016311
Dere14g1079 725 SUPERFAMILY Actin depolymerizing proteins 264 363 - -
Dere14g1079 725 MobiDBLite consensus disorder prediction 646 662 - -
Dere14g1079 725 CDD DSP 119 253 - -
Dere14g1079 725 PANTHER MKPA PROTEIN 17 661 - -
Dere14g1079 725 SMART dsp_5 118 257 IPR020422 GO:0006470|GO:0008138
Dere14g1079 725 MobiDBLite consensus disorder prediction 470 491 - -
Dere14g1079 725 MobiDBLite consensus disorder prediction 684 725 - -
Dere14g1079 725 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 109 260 IPR029021 -
Dere14g1079 725 Gene3D Protein tyrosine phosphatase superfamily 92 260 IPR029021 -
Dere14g1079 725 MobiDBLite consensus disorder prediction 1 57 - -
Dere14g1079 725 MobiDBLite consensus disorder prediction 624 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1079 Dere-ChrDere14 10761983 10764160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1079 18 154 Protein tyrosine phosphatase (PTP) family AT3G55270 43.529 7.64e-32 130