Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1074 ATGGATCATACCTTTCATTCCACTTCCTATTCCTATGTTAATCTTTTATTAGTTACTTTATGTGCCTTCTTGTTATTTGGTGGTTCAGTTGCTAAATCCGTGCAATTCCCCCTGCATGTATGGTTACCAAATGCTATGGAAGGGCTTACCCCTATTTTCGATCTTATCCATGCTGCTACTATGATAGTGGCGAGAATTTTTCTTGTAGCCCGGCTTCTTCCTCTTTTCATAGTTATACCTTCCATAATGGATGGAATAACTTTGATAGGCATAATAACAATAGTATTAGGAGCTACTTTAGCTCTTGCTCAAAAGGATATTAAGATAAATTTGGTTTATTCTATAATGTCTCAATTGGGTTATATGATGTTAGCTCTAGGATCCAAATCCATTATTCATTTAATGGAAGCTATTATTAGATATTCTCTAGATAAAAGTCAAAATATGGTTCTTATGGGCGATGCTTCCTCCTTGAAGCGGAAGAGGCCTCCCACAATTGAGATCCCAAGTATCTTGCAAGAAATCCAGATAGACAAGCTTAATGATTCCAAGGCGTCGAAGGAGAATGTTTCTTTTAGTGGAATTGGGTTTGGGGTTTCTTCTGTAAAAGGCAAGAAATCGTGCATGGAAGATACTCACAAGATTGTTTCCTCAGTAGAGAGCAACTCGAAGAAAGGATTTTTTGGCGTCTACGATGGGCATGGTGGCAGAAAGGCTGCAGAGTTTGTCGCTGAGAACTTGCACACCAACATTCTCAAAATGATGGAGAATTCTGACGAGTCAAAGGCTAAGGAAGAGGCAGTTAAAGCTGGAATCTCATTCTTCGTTGACGGTGGAAATGCCGATTTCATGCAGGGAATTGGAAGCGGTGCCTGTTGTGTAACAGCCCTGATAGAAGGGAAGGAGATTGTTGTTTCAAATGTGGGAGATTGCCGGGCTGTTCTTTCCAGAGGTGGAGTGGCTGAAGTTCTCACAAGAGATCACAGAGCGGAACTGGAGGATGAACGGAGAAGAATTGAAGATAAGGGAGGATATGTGGAGATTCATCGAGGAGTATGGAGAGTTCATGGGGTACTCTCTGTTTCTAGAAGCATTGGAGATGCTCATCTGAAGGACTGGGTGGTGGCTGAGCCTGATACAAAGATTTTACAATTGACTGCAGACATGGAGTTTCTTGTTTTGGCTTCTGATGGACTGTGGGAAGAGGTTGGTAACCAAGAAGCTGTTGATACTGTGACACGTTTATGTCGAAATGAAGAGAGGCTAAATTCCTCTGGAGATCTACAAAACGGTGTTGATGATGATTATGGTTGCGTGAACGTAAGTCCTTCATCGAAGCTGCGGAGAGTTTCACTTGTAAAGCAGCCAAGGTGTTATAAAAAGACATTGAATAGTTGGAAAGAAGCTGATGAAGACGATTTTGCTTGTGAAAATGAAAACCCTTCATCAAAATCTCGAAGAATTTCGTTGGAGAAGCGAGTACATACGAAAGAAGAGACACCGACAAAAGAAAGCAACACGTGCAAGAAGACATTGAATAGCTGGAATGATGATTTTGCATGTGAAAATGAAAGCCCTCCATCAAAATGTCGAAGAATTTCATTAAAAGGGCGAGTAAGAATGAAAAAAGAGACACCGATAAAAGAAAGCAACACGTGCCAGAAAAGTGCATCTGCTGGACTTCTAGCTGCCTGTAAGGAGCTTGTGAACCTTGCTGTGAAGAAGGGTACTTTGGATGATATCACTGTCATGATAATTGATTTAAATCACTTCAGGAACGACATCTGA 1788 0.4105 MDHTFHSTSYSYVNLLLVTLCAFLLFGGSVAKSVQFPLHVWLPNAMEGLTPIFDLIHAATMIVARIFLVARLLPLFIVIPSIMDGITLIGIITIVLGATLALAQKDIKINLVYSIMSQLGYMMLALGSKSIIHLMEAIIRYSLDKSQNMVLMGDASSLKRKRPPTIEIPSILQEIQIDKLNDSKASKENVSFSGIGFGVSSVKGKKSCMEDTHKIVSSVESNSKKGFFGVYDGHGGRKAAEFVAENLHTNILKMMENSDESKAKEEAVKAGISFFVDGGNADFMQGIGSGACCVTALIEGKEIVVSNVGDCRAVLSRGGVAEVLTRDHRAELEDERRRIEDKGGYVEIHRGVWRVHGVLSVSRSIGDAHLKDWVVAEPDTKILQLTADMEFLVLASDGLWEEVGNQEAVDTVTRLCRNEERLNSSGDLQNGVDDDYGCVNVSPSSKLRRVSLVKQPRCYKKTLNSWKEADEDDFACENENPSSKSRRISLEKRVHTKEETPTKESNTCKKTLNSWNDDFACENESPPSKCRRISLKGRVRMKKETPIKESNTCQKSASAGLLAACKELVNLAVKKGTLDDITVMIIDLNHFRNDI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1074 595 ProSitePatterns PPM-type phosphatase domain signature. 227 235 IPR000222 GO:0043169
Dere14g1074 595 Gene3D - 188 593 IPR036457 -
Dere14g1074 595 PANTHER PROTEIN PHOSPHATASE 2C 184 587 IPR015655 GO:0004722|GO:0006470
Dere14g1074 595 SMART PP2C_4 186 586 IPR001932 -
Dere14g1074 595 SUPERFAMILY PP2C-like 188 590 IPR036457 -
Dere14g1074 595 CDD PP2Cc 195 424 IPR001932 -
Dere14g1074 595 Pfam Proton-conducting membrane transporter 13 143 IPR001750 -
Dere14g1074 595 PRINTS NADH-ubiquinone oxidoreductase chain 5 signature 118 130 - -
Dere14g1074 595 PRINTS NADH-ubiquinone oxidoreductase chain 5 signature 50 76 - -
Dere14g1074 595 PRINTS NADH-ubiquinone oxidoreductase chain 5 signature 28 49 - -
Dere14g1074 595 ProSiteProfiles PPM-type phosphatase domain profile. 196 588 IPR001932 -
Dere14g1074 595 Pfam Protein phosphatase 2C 196 416 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1074 Dere-ChrDere14 10731237 10736745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1074 156 592 PP2C-type Phosphatase Gene Family AT1G67820 48.190 3.16e-120 360