Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1072 ATGGGACTCTCCAACTTCCCAAGTGCATCAGAAGGAGTACTTCCCGTGCTGGTAATGAACACAGTCATGTCAGTGGCTCTGTTGAAGAACATGTTTAGATCTCTTCTCCAAGTGGTTGGTGCTACTTGCTCGTATTCTTCTGCAAACCCAAATATCAACATGGAGGCAGATTCAGAAGATGATGAGAGTTCGAGTAGAAGAAGGAGGAGAATCTCAGTGACTCAGTACAAATCCATGAGTAGAGGGTGGGGCATGGTGGAGTGCTGCGTGTGTCTGTGTAGGTTTCATGGAAGTGAGGAGGTGAGCGAGTTGTCTTGCAAGCATTTCTTTCACAAAGCTTGCTTGGACAAGTGGTTTTATAACAGACACTCCACATGCCCTCTCTGAACAGAATCAGAGGAAGTTGTGATGATGTTGCTATGTGTGCCTGGAATCCTCCCAAGAGGCTATGGAGGGATTGCTAGTGAATCTCAAATCCCTCGTTTCAGCACTTGA 495 0.4646 MGLSNFPSASEGVLPVLVMNTVMSVALLKNMFRSLLQVVGATCSYSSANPNINMEADSEDDESSSRRRRRISVTQYKSMSRGWGMVECCVCLCRFHGSEEVSELSCKHFFHKACLDKWFYNRHSTCPLXTESEEVVMMLLCVPGILPRGYGGIASESQIPRFST 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1072 164 CDD RING-H2 88 128 - -
Dere14g1072 164 PANTHER - 1 130 IPR044249 -
Dere14g1072 164 ProSiteProfiles Zinc finger RING-type profile. 88 128 IPR001841 -
Dere14g1072 164 SUPERFAMILY RING/U-box 87 128 - -
Dere14g1072 164 Pfam Ring finger domain 87 128 IPR001841 -
Dere14g1072 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 135 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1072 Dere-ChrDere14 10709854 10710466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1072 1 128 C3H Transcription Factor Family AT2G04240 34.266 1.33e-19 79.0