Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1064 ATGGCTACCCGAACAACTTGTGCACCAATACCTTCGCCTCTTCCCTCACCAATACTGCCAGAGCTACCGAGGATTTCATGGTACTCTCGCTTCCCTGATAGTGATCAGAAAGATCAACACCAGGTTCTTCTTGTCGTTATAACTTTCCTACTCTTAGCTACCATGGTTGGTGTGACACTTTTTTTCTTCACCGTTTTCAACATTCTGGGACACTATTGTTCAAGGAGAATTTACCCGAGGAGGCGACGCCAACCCATATTGTTAGGTGATTCTCGCTTTTCGGATGGTGATGGAGCGGCCCTTGACTACCCCATATTCATCAACCGTCTGGGCCTCCAGCAATTTATTATAGATTCCATCCCCGTCTTTCATTACAGAAAAGACGAGAGATTAATAGAAGGAACAGAGTGTTCTGTTTGCCTCTGCGAGTTTCAAGAACACGAGAGTCTCAGACGTTTGCCTAGGTGTAATCATGCTTTTCACATCCCTTGTATTGATGCCTGGTTCATATCGCATCAAAATTGTCCCTTGTGCCGTGCCCCTGTAGTTCAAGACACTGGTGGTACAGAGGCAAGCACTACTGTGGCTAATTCAAACGTTTCTGGTCAGAACGAAGAAGCCCAGAAGGAAAAGATGTCTCCAGTTATGAATGATATGGAAATACGATCAGTGAGGAGGTCGGCTTCGGTGGATTTTTGTTCTGCTTCAATGAAATATCCTGCTTTGGTCGCTTTAGATTGTGATATAGAGAGCTCAGACACCCACTTGGAAGAAAGAAATTCATGTGACAAGAGGATAGCCATCAGTCAGCAGGGTAGTGGAAGTTCCTCCATTTACAAACTGGCTTCAATTGGACGTGCATTACAGAAGATGCCCATCTCATTGAAAAGTTCTTCTTCACATGGCCAAAATTTCCTATTTTCCAGACATAGCAGGAGCCAGAGCTCAAGCCTTCCTTCGTGA 963 0.4496 MATRTTCAPIPSPLPSPILPELPRISWYSRFPDSDQKDQHQVLLVVITFLLLATMVGVTLFFFTVFNILGHYCSRRIYPRRRRQPILLGDSRFSDGDGAALDYPIFINRLGLQQFIIDSIPVFHYRKDERLIEGTECSVCLCEFQEHESLRRLPRCNHAFHIPCIDAWFISHQNCPLCRAPVVQDTGGTEASTTVANSNVSGQNEEAQKEKMSPVMNDMEIRSVRRSASVDFCSASMKYPALVALDCDIESSDTHLEERNSCDKRIAISQQGSGSSSIYKLASIGRALQKMPISLKSSSSHGQNFLFSRHSRSQSSSLPS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1064 320 CDD RING-H2_EL5-like 136 179 - -
Dere14g1064 320 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Dere14g1064 320 SUPERFAMILY RING/U-box 115 188 - -
Dere14g1064 320 Pfam Ring finger domain 136 179 IPR001841 -
Dere14g1064 320 MobiDBLite consensus disorder prediction 189 213 - -
Dere14g1064 320 MobiDBLite consensus disorder prediction 299 320 - -
Dere14g1064 320 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 187 IPR013083 -
Dere14g1064 320 SMART ring_2 137 178 IPR001841 -
Dere14g1064 320 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 40 186 IPR044675 -
Dere14g1064 320 MobiDBLite consensus disorder prediction 189 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1064 Dere-ChrDere14 10643209 10644272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1064 42 183 C3H Transcription Factor Family AT1G72220 40.559 5.39e-30 116