Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1060 ATGAAGAGACTTGGCAGCTCAGATTCTTTGGGTGCTCTCATGACCGTCTGTCCATCCACAGAGGAACACAGTCCGAGGAACAACACCACCAACCGCGCGTATAGTAGGGAGTTCCAATCCATGTTGGACGGACTAGACGAAGAAGGATGTGTCGAAGAATTAGGCCATCCAACGGAGAAGAAACGCCGTCTCAGCGTCGATCAAGTGAAGGCCTTAGAGAAGATCTTCGAGGTTGAAAACAAGCTTGAACCTGAGAGGAAGTTGAAGCTTGCCCAAGAACTCGGATTGCAGCCCCGACAAGTGGCTGTCTGGTTCCAAAACCGTCGAGCTAGATGGAAAACCAAGCAATTGGAGAGAGACTACGGCGTTCTCAAAGCCAATTATGATACTCTCAAACTCAACTACGATGCCCTCCAGCAAGACAATGAAGCCTTGCTCAAAGAGATTAAGGAATTAAAATCTAGATTACAAGACGAGAAGAGTGAAGATGTGTCAGTGAAGGAGGAGATAACACAGCCTGAGTCCGACGAGAAAGCGATGGGAGTGGGTGTGGCACCTCCTGAAACCGCCATTCTGGGAGCTGAGTCGGAAGACTTAAATTACGAGGGCTTCAACAGAAACGACGTCGTAGGAGGCGGATCACTCTTCCCTCCAGACTTTAACAAAGACGGCTCTTCGGATAGCGACTCAAGCGCAATATTGAACGAAGATAACAGCCCCAACGCCGGCATTTCTTTGATGTCTCCCGGTTCTTCTTCCTTGAAATTCAATTTGTCTTCATCCTCGTCGTCCATGAACTGCTTTCAGTTCCAGAAAACATACTCTCAGACTCAATATGTGAAGATGGAAGAGCATAACTTCTTCAGCGACGAGGCCTGCAATTTCTTCTCGGATGAACAGGCGCCAACCCTCCAGTGGTACTGGAGTTAA 930 0.4839 MKRLGSSDSLGALMTVCPSTEEHSPRNNTTNRAYSREFQSMLDGLDEEGCVEELGHPTEKKRRLSVDQVKALEKIFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDTLKLNYDALQQDNEALLKEIKELKSRLQDEKSEDVSVKEEITQPESDEKAMGVGVAPPETAILGAESEDLNYEGFNRNDVVGGGSLFPPDFNKDGSSDSDSSAILNEDNSPNAGISLMSPGSSSLKFNLSSSSSSMNCFQFQKTYSQTQYVKMEEHNFFSDEACNFFSDEQAPTLQWYWS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1060 309 CDD homeodomain 60 116 IPR001356 GO:0003677
Dere14g1060 309 Pfam Homeobox associated leucine zipper 115 157 IPR003106 GO:0006355|GO:0043565
Dere14g1060 309 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Dere14g1060 309 FunFam homeobox-leucine zipper protein ATHB-6-like 63 109 - -
Dere14g1060 309 MobiDBLite consensus disorder prediction 215 245 - -
Dere14g1060 309 Coils Coil 121 169 - -
Dere14g1060 309 Gene3D - 54 122 - -
Dere14g1060 309 MobiDBLite consensus disorder prediction 221 245 - -
Dere14g1060 309 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Dere14g1060 309 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Dere14g1060 309 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Dere14g1060 309 SMART HOX_1 58 119 IPR001356 GO:0003677
Dere14g1060 309 SUPERFAMILY Homeodomain-like 44 117 IPR009057 -
Dere14g1060 309 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Dere14g1060 309 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 51 308 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1060 Dere-ChrDere14 10621375 10622665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1060 1 307 Homeobox Transcription Factor Family AT2G22430 48.071 4.01e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere14g1060 Homeodomain 2.1e-16 CL0123