Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1051 ATGCTTGATGCCAGCCTTCAAAATGATGAAGATGCCCCACCAAAACCAGTAGAAGCAGAAATAATAGAAGCACTGAGATTATCTGCTAGAGCTTTGAAGCTTGCAAGTACAACAATGGAACGGTATGATATAATCAAAGATATTGGGTCCGGGAACTTTGGGGTGGCAAAGCTGGTGAGGGAGAAACGGAGTGGTGACTTATATGCTATCAAGTTCATAGAGAGAGGCCTTAAGATTGATGAGCATGTGCAAAGGGAGATTATAAACCATAGGTCCTTGAAGCATCCCAATATCATTAGATTTAAAGAGGTGTTGCTCACTCCCACTCATCTTGCCATAGTGATGGAATATGCCGCTGGGGGAGAACTCTTTGGAAGAATATGCAGTGCGGGTAGATTCAGTGAAGACGAGGCGAGATATTTCTTTCAGCAGTTGATTTCTGGAGTCAGCTATTGCCATTCAATGAAAATTTGCCACAGAGATCTTAAGCTGGAAAACACACTCTTAGATGGAAGCACAGCACCACGACTCAAAGTTTGCGACTTTGGCTACTCAAAGTCATCTGTTCTGCACTCTCAGCCGAAATCCACAGTAGGAACCCCTGCCTATATTGCACCAGAGGTATTGTCAAGAAGGGAGTATGATGGGAAGGTTGCAGATGTTTGGTCATGTGGAGTGACCCTGTATGTCATGCTGGTTGGTGCTTATCCTTTTGAAGATCCTGAAGATCCTAGAAACTTCAGAAAAACACTTCAGCGAATTCTCAGTGTCTACTATTCAATTCCAGACTATGTTCGTGTTTCAAACGAGTGTAAACACCTTCTATCTCGAATATTCGTGGCCAACCCAGAGAAGAGAATTACGATCCCAGAAATTAAAATGCACACATGGTTCCTGAAGAACTTGCCACTAGAATTGACGGAGGAAGGAGGAGAAAATGGAATGCAAGAAGAAGAAGTGAATAATTCATGCGAGAGGCAGAGCATCGAAGAAATACTGTGTATAATTCAAGATGCTCGAAAAGCAGGGGATCAGGGCCCAAAAGTTGGTGGGCAGTTTGTTGGGATGGGAAGCATGGATTTGGATGAGATGGATGCTGATGCTGACATTGATGATATAGAAACAAGCGGCGATTTTGTCTGTGCTTTGTTATTCATTTTCTTCCATCTCTTAATTGTCCTTGACCTAATATCAGAGATTTACAACACTGGCCAAGTCCAAGTCCAAGACCCAGATGACGAGTCCATCCCCGCTTGGTTAAAGATTCGACCCTCTTCCGGATCTGGCTGCTTCTCGCTCACTTGCACTGCATTTCCAAAAGCAGGGCTCCGACAGTTATACGGCAACATGGGCGGGGGCAGGAGAGGTGGCAGGGCTCGCACTCAAAGAAAGCACTTCCAGCAAAGCAGAGAGAATGTCTGGAAGCACCCAAAACCTGATCCTTCCTCCCAAAATGGACTTGATAATCCTACTTGGACGCCCTTCGCCACTCAGAACCCTGCTTTTGATGATTATTACAAGGAGCAAAGGATAGTGGCCTCTGAAGAGTGGGACGCATTCGTGGAAGTTCTCAGAACTCCATTGCCTGCAACCTTTCGAATCAACTCAAGTAGCCAATTTTCTGCAGACATTCGGTCACAATTGGAGAATGACTTTGTGCAATCTCTTCAGGCTGAGGTTGTCGATGGCAGTAAGACAGAGGCTATTAGACCTTTGTTGTGGTACCCTGAAAATCTTGCTTGGCATACAAATTTTTCCCGGATGCAGTTGAGGAAGAACCAAACACTTGAGAGGTTCCATGAATTCTTAAAGCTTGAAAATGAAATTGGAAATATCACAAGACAAGAAGCTGTCAGCATGGTGCCCCCCCTCTTCTTGGATGTACATTCGAATCATTTCGTACTTGATATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTACTTGAGATTATACACCATTCATGTAAAGCAGGATCACTACCTGATGGAATGGTAATGGCAAATGATCTTGATGTCCAAAGATGTAACCTTCTCATCCACCAAACTAAACGAATGTGCACAGCCAACCTAATCGTCACTAATCATGAAGCTCAGCACTTCCCGGGATGCCGTTTAAACAGAAATCATGATAACATGGAATCAGAATGGCATATTAACCAACTTATATTCGATCGTGTTTTGTGTGATGTTCCATGCAGTGGAGATGGCACACTTCGTAAGGCACCTGATCTTTGGAGGAGATGGAATACGGGGATGGGCCATGGGCTTCATAGCCTTCAAGTTCTTATAGCTATGCGAGGTGTATCTTTACTCAAAGTTGGTGGAAGAATGGTTTATTCAACCTGCTCCATGAACCCTATAGAGAATGAAGCTGTGGTTGCAGAGATTTTGAGGAGGTGTGGAGGGTCTGTTGAACTTGTTGATGTGTCTCATGAGCTCCCTCAACTTACTCGTCGGCCAGGTCTCAAGAGATGGAAGGTACATGACAAGGGCATGTGGCTGGTCTCTTACAAAGATGTTCCCGAGTCACGCAAAAGTGTAATTCTTCCCAGCATGTTTCCTTCTGGCAGAAGCTTTCAGGATCTTGTTGGTAGTAATCATTACGTGGACATGCAAAATGTTATTAATAATGGTGTTAATGGTAATTCTGAAGATGGTGTTCAAGCAATGGAGAATTCTTTGACATATGAGTTCATTGAGGAAGTTTCTGATTACCCACTAGAGCATTGCATGAGGACAGCACCTCATGATCAAAATACTGGAGCCTTCTTTATTGCTGTTCTGCAAAAAGTTTCTCTTCTACCAGCAATTCAGGAAAAACCTAAAAAAGGAATTGCCAAGAAACATGTAAAACCAGCAAACCAGGATATTGAGGATAAACAAGTGTTGCAGGTTAATTCATTAAAAATTACATGTGAGGAAGTTTTAGAAGTGGTTTCAGAGGATGATGCAAATGAAAATAAACCCAATACTGTAGATTTAGAAGTTACTCCTTCTGTTTCACATCAAAAGTGGAATTCAGAGGAAGCCCAAGAGCCTTGCAATGCAGAAAGCATAGCAAAGGTGACTCGTGAAAAAAGAAAGCTGCAGATTCAAGGCAGGTGGAGAGGTGTTGACCCTGTTATTTTCTTCAAGGATGAAGTCATTATTAACAGCATAAAGGCATTTTATGGTATTGATGAGCAGTTTCCATTCAACGGTCACCTAGTTTCAAGAAACAGTGATCCAAACCATGTGAAAAGGATTTACTATATCTCCAAATCAGTCAAGGATGTTCTTGAACTAAATTTCTCAGTTGAGCAGCCGCTTAAAATTGCATCCATTGGTCTGAAGATGTTTGAAAGACAATCATCACGAGAAGGTAGCTCTGCACCATGTTCTTTCCGGATATCATCTGAAGGATTGCCCATTATTCTCCCATTCATCACCAAACAGATTCTACATGCATCTCCTGTAGACTTTAAGCTTCTTCTGCAGAAAAAAGCTGTAAGATTTGCAGATTTTGTTGATGTTGAGTTTGGTGAAAAAGCAGCAAATCTTGTGCCAGGATGTTGTGTGGTGGTGCTGGGTAAAGGGAACACAAATAATTTGGAGTCATTCCAGGTAGATGAGTCAACCATAGCCATTGGATGCTGGAAGGGTAGGGCCAGTTTGACAGTGATGGTTACTGCAATTGATTGCCAAGAACTTCTTGAAAGGCTTCTAATACGTTTAGACACAGAACATGGCTCTTCTGTGATCGTAGACAAACACTCAAATAATGTAGTAGATGAAGTAGACAAGTCGAACGGTATAACTAATTATGTGGAAGCCAGTCGGAGTTGA 3828 0.4263 MLDASLQNDEDAPPKPVEAEIIEALRLSARALKLASTTMERYDIIKDIGSGNFGVAKLVREKRSGDLYAIKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYAAGGELFGRICSAGRFSEDEARYFFQQLISGVSYCHSMKICHRDLKLENTLLDGSTAPRLKVCDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVYYSIPDYVRVSNECKHLLSRIFVANPEKRITIPEIKMHTWFLKNLPLELTEEGGENGMQEEEVNNSCERQSIEEILCIIQDARKAGDQGPKVGGQFVGMGSMDLDEMDADADIDDIETSGDFVCALLFIFFHLLIVLDLISEIYNTGQVQVQDPDDESIPAWLKIRPSSGSGCFSLTCTAFPKAGLRQLYGNMGGGRRGGRARTQRKHFQQSRENVWKHPKPDPSSQNGLDNPTWTPFATQNPAFDDYYKEQRIVASEEWDAFVEVLRTPLPATFRINSSSQFSADIRSQLENDFVQSLQAEVVDGSKTEAIRPLLWYPENLAWHTNFSRMQLRKNQTLERFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSNHFVLDMCAAPGSKTFQLLEIIHHSCKAGSLPDGMVMANDLDVQRCNLLIHQTKRMCTANLIVTNHEAQHFPGCRLNRNHDNMESEWHINQLIFDRVLCDVPCSGDGTLRKAPDLWRRWNTGMGHGLHSLQVLIAMRGVSLLKVGGRMVYSTCSMNPIENEAVVAEILRRCGGSVELVDVSHELPQLTRRPGLKRWKVHDKGMWLVSYKDVPESRKSVILPSMFPSGRSFQDLVGSNHYVDMQNVINNGVNGNSEDGVQAMENSLTYEFIEEVSDYPLEHCMRTAPHDQNTGAFFIAVLQKVSLLPAIQEKPKKGIAKKHVKPANQDIEDKQVLQVNSLKITCEEVLEVVSEDDANENKPNTVDLEVTPSVSHQKWNSEEAQEPCNAESIAKVTREKRKLQIQGRWRGVDPVIFFKDEVIINSIKAFYGIDEQFPFNGHLVSRNSDPNHVKRIYYISKSVKDVLELNFSVEQPLKIASIGLKMFERQSSREGSSAPCSFRISSEGLPIILPFITKQILHASPVDFKLLLQKKAVRFADFVDVEFGEKAANLVPGCCVVVLGKGNTNNLESFQVDESTIAIGCWKGRASLTVMVTAIDCQELLERLLIRLDTEHGSSVIVDKHSNNVVDEVDKSNGITNYVEASRS 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1051 1275 Gene3D Phosphorylase Kinase; domain 1 26 117 - -
Dere14g1051 1275 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 520 932 IPR001678 GO:0008168
Dere14g1051 1275 ProSitePatterns NOL1/NOP2/sun family signature. 724 735 IPR018314 GO:0003723|GO:0008168
Dere14g1051 1275 SUPERFAMILY Protein kinase-like (PK-like) 35 304 IPR011009 -
Dere14g1051 1275 MobiDBLite consensus disorder prediction 452 494 - -
Dere14g1051 1275 SMART serkin_6 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1051 1275 FunFam Serine/threonine-protein kinase SRK2E 39 117 - -
Dere14g1051 1275 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 809 828 IPR023270 GO:0016428
Dere14g1051 1275 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 581 602 IPR023270 GO:0016428
Dere14g1051 1275 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 1104 1116 IPR023270 GO:0016428
Dere14g1051 1275 CDD STKc_SnRK2 41 297 - -
Dere14g1051 1275 ProSiteProfiles Protein kinase domain profile. 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1051 1275 Pfam Protein kinase domain 42 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1051 1275 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 502 932 IPR029063 -
Dere14g1051 1275 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 497 839 - -
Dere14g1051 1275 FunFam Serine/threonine-protein kinase SRK2E 118 306 - -
Dere14g1051 1275 Gene3D Transferase(Phosphotransferase) domain 1 118 305 - -
Dere14g1051 1275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Dere14g1051 1275 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 462 1243 IPR023267 GO:0001510
Dere14g1051 1275 Gene3D Vaccinia Virus protein VP39 497 853 IPR029063 -
Dere14g1051 1275 Pfam 16S rRNA methyltransferase RsmB/F 625 810 IPR001678 GO:0008168
Dere14g1051 1275 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Dere14g1051 1275 MobiDBLite consensus disorder prediction 478 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1051 Dere-ChrDere14 10539322 10551633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1051 41 308 CBL-interacting serine-threonine protein kinases AT4G24400 42.599 1.34e-61 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dere14g1051 Pkinase 2.9e-68 CL0016