Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1049 ATGGATGAGGAAGAGCACGAGGTGTACGGAGGCGAGATCCCAGATGTTGGCGAGATGGAAGGGGACTTGGACCCTCACAATGCCGACGTCGATATGGCAGCTGCCGATGATGAAGCCGTTAAGGAGCTGGACGAGATGAAGAAGCGATTGAAGGAGATGGAAGAGGAGGCTGCAGCTCTTCGTGAGATGCAGGCCAAGGTCGAGAAGGAGATGGGCGCGGTTCAAGATCCTGCTAGTGCAGCTGCTTCTCAGGCAAGCAAGGAGGAGGCGGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTACGCATGCACACCAGAAGAAGTGCAGCAACACTTCCAATCATGTGGTACGGTGAACAGGGTCACTATATTGACAGACAAGTATGGCCAGCCTAAGGGTTTTGCTTATGTGGAATTCCTTGAAACCGAAGCTGTACAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAGTTGAAGGTTCTACCTAAGAGGACCAATATTCCTGGAATGAAACAGTATCGTCCCAGGCGTTTCAATCCTCACCTGGCATACCGCTTCAGGAGGCCATACCCTCCTCCTTACTCTTACTCCCCTTATGGATATGGGAAGTTCCCCAGGTTTAGAAGGCCAGGTCGATACATGCCTTACTATTAG 666 0.503 MDEEEHEVYGGEIPDVGEMEGDLDPHNADVDMAAADDEAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNIPGMKQYRPRRFNPHLAYRFRRPYPPPYSYSPYGYGKFPRFRRPGRYMPYY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1049 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Dere14g1049 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 29 182 - -
Dere14g1049 221 MobiDBLite consensus disorder prediction 69 90 - -
Dere14g1049 221 CDD RRM_II_PABPs 94 165 - -
Dere14g1049 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
Dere14g1049 221 Coils Coil 36 70 - -
Dere14g1049 221 SUPERFAMILY RNA-binding domain, RBD 83 189 IPR035979 GO:0003676
Dere14g1049 221 FunFam Polyadenylate-binding protein 1 32 165 - -
Dere14g1049 221 Gene3D - 30 165 IPR012677 -
Dere14g1049 221 MobiDBLite consensus disorder prediction 1 28 - -
Dere14g1049 221 SMART rrm1_1 94 165 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1049 Dere-ChrDere14 10526927 10531956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1049 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 1.61e-09 55.5